Magnolia sinica: 131233825
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Entry
131233825 CDS
T09699
Name
(RefSeq) protein PAF1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msin03021
]
131233825
Transcription machinery [BR:
msin03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
131233825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
131233825
NCBI-ProteinID:
XP_058086622
LinkDB
All DBs
Position
18:complement(29992716..30017490)
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AA seq
707 aa
AA seq
DB search
MASFRPFPPPHSFGPQSQTPLPPPPQNHYPQNRSFSGSQPSVPSSSYPPPQNPQNYNQIH
PNSNHHHGYNSNPPSHHFGQSRMHQPSQQQQYPFPPFQPPSSINLQQQPHPQPPNSLYYP
PSSQYSQFDPHGPTPPPPPPPMPPPPSSPPPPPPPTLPPPPLPPAPSVPPPPQHQSSAAK
EAVVGVHGREKLAFPPKPQKGSTAPAGKVGSVQVSNGPPAAVGRVETEEERRIRKKREYE
KQRMEEKRRQQLKESQSNPLHRAQMASASGAKAHGSMAGSRMGERRAGPFLGGERIENRL
KKPTTFLCKLKFRNELPDPTAQPKLLALNTNKDQYTKYTITSLEKMHKPQLFVEPDLGIP
LDLLDLSVYNPPKERPPLAPEDEELLRDDEAVTPVKQDGIRRKDRPTDKGVSWLVKTQYI
SPLSMDAAKLSISEKQAKELRESREGRNLFLENLNNREKQIQAIEESFKASKLRPVHQTN
PNLEPVEILPLLPDFDRSDDQFVVAAFDSDPTADSEIYNKLDRSVRDEHESRAVMKSFVS
AGSDPSKPEKFLAYMVPAPDELSKDMYDEDEDVQYSWVREYHWDVRGDDADDPTTYLVSF
DEEAARYLPLPTKLNLQKKRAKDGRSSDEVEHYPVPAKLTVRRSSEVACREVKDSGASSS
HGDLKSKVDISNLKRGRSAGEDDLEMQDKAARVEDEDHFSGAEDMSD
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggcatccttccgaccctttcctcctccccactccttcggtccgcagagccaaacccct
ctccctccacctccccaaaatcactaccctcagaaccggagcttcagcggatctcagccg
tccgttccttcctcttcctacccacctcctcagaatcctcagaactacaaccaaatccac
ccaaattcaaatcaccatcatggatacaatagcaatcctccttcccatcacttcggtcaa
tcaaggatgcaccagccatcccaacagcagcaatatcccttcccaccattccaacctcca
tcttcgataaatttacaacagcaaccgcaccctcaaccaccgaattccctatactatcct
ccttcttctcagtactcccaattcgacccacatgggccgaccccaccacctccaccgccg
cccatgccgccacccccttcatctccgcccccaccgccccctcccaccctcccccctcca
ccgctgccacctgccccttcagtcccgccaccaccccagcatcagtcgtcggcagctaaa
gaagctgtagttggggtccatgggcgcgaaaagctggcatttccgccaaagccacaaaag
ggttccactgctcctgctgggaaagtgggctcagtgcaggtgtccaatggcccgcctgct
gcagtcgggagagttgagacggaagaggagaggcggatacggaagaagagggagtatgag
aagcagaggatggaagagaagcggcggcagcagttgaaggagtcacagtcgaatcctctg
catagggcacagatggcgtcggcatcgggggcgaaggcgcatgggtcaatggcagggtcg
cgaatgggggagaggcgggctggaccattcttgggtggggagaggatcgaaaacaggctg
aagaagccgacaacgtttttgtgcaaattgaagttcaggaatgagctgccggatccaaca
gctcagccgaagttactggctttgaacactaataaagaccaatacaccaaatacaccatc
acatcactagagaaaatgcacaagccccaactttttgttgagcccgatcttgggatacct
cttgacctgcttgacctgagtgtatacaatcctcccaaagaaaggccaccccttgctcca
gaagatgaggagctattgcgtgatgatgaggcagtaacccctgtgaaacaggatggtata
aggagaaaagaccggcctactgataaaggtgtttcttggctggttaaaacacaatatatt
tctcctctgagcatggatgctgcaaaactgtccatatctgaaaaacaagcgaaggagcta
cgggaatcaagggaaggacgcaatcttttcttggagaatcttaataatagggaaaaacaa
atccaggcaattgaagaatcgtttaaggcatccaaattacgccccgtccatcaaactaat
cctaatttagaacctgttgagattctgccgctgctacctgattttgaccggagcgatgat
cagtttgttgtggctgcctttgatagtgatcctacagctgactcagaaatctacaacaag
ttagatcgatctgttcgagatgagcatgaatcacgggctgtcatgaaaagttttgtatca
gctggctcagatccatctaaacctgagaagtttctggcatacatggtccctgcaccagat
gagctgtcaaaggatatgtacgacgaagatgaagatgtccagtattcctgggttagagag
tatcattgggatgtgagaggtgacgacgctgatgatcccacaacataccttgtcagtttt
gatgaagaagccgcccgctacttgcctctcccgacaaagcttaatttacagaaaaagagg
gctaaagatggcaggtccagtgatgaggttgaacactatcctgtacctgcgaaattgact
gtaaggcggagctcagaagttgcttgtagggaagtgaaggattcaggagcgtcatcgagt
catggcgatctaaagtctaaagtagatatttcaaatttgaagaggggaaggtctgctggt
gaagatgatctggaaatgcaggacaaagcagcacgagtggaagatgaagatcactttagt
ggggcagaagacatgtctgattga
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