Magnolia sinica: 131233895
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Entry
131233895 CDS
T09699
Name
(RefSeq) E3 ubiquitin protein ligase RIN2 isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
msin
Magnolia sinica
Pathway
msin04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131233895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msin04121
]
131233895
Enzymes [BR:
msin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
131233895
Ubiquitin system [BR:
msin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131233895
Multi subunit type E3
ERAD complex
131233895
LMBR1L-GP78-UBAC2 complex
131233895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUE
zf-RING_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_11
zf-ANAPC11
zf-C3HC4_2
zf-C3HC4_3
zf-RING_16
zf-RING_5
zf-C3HC4_4
RINGv
E3_UbLigase_EDD
PHD
zf-HC5HC2H
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
131233895
NCBI-ProteinID:
XP_058086716
LinkDB
All DBs
Position
18:12195904..12224000
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AA seq
585 aa
AA seq
DB search
MGVNYLSASAVCTVISLLGLQWWTDSALDKIRSDGLISEDSIHSENATRVVELLLGSQVT
VALVANFALNVFILLILCLKTVFFVQLYPSETRKVVERLVNYVVYKGMFLPLVVPPTIFQ
AALWSTWLTVLCSLKMFQSLARDRLERLNASPSATPWTYFRVFSVLLLVLSIDIFWIRLC
MIIYRALGSNILLLLFFEPLSMAFETLQAIMIHGFQLLDLWHRHSVDGSADCQRSHLFDR
SSAGSLWEWKGILLRNLGFFLDLMTLLMALGHYLHIWWLHGMAFHLVDAVLFLTFRALVS
AIVKRIKGFVKLRMALSTLHGALPDASSEELRTYNDECAICREPMARAKKLACNHLFHLA
CLKSWLDQGLNEVYSCPTCRRPLFVGSTGDNMTSRAGDLLNDEQLARRISSGLDQQSAAG
HALPIGAFSNQQQNPTDSSVWRGVDQSWAHPWPGPGSDGAGPSTAIRSVGFGRVQMMMRH
LTSVGETYAHTALEDTAWSLWPMTHPQAPSSSSIPPVLPAARYNGNMGGLRFRSTSPSAS
GNLSGILAMAETVREVLPHIPDEIIIQDLQQTNSVAVTVNNLLHM
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgaattatttgtctgcttctgccgtgtgtacggtgataagcctcttggggctc
cagtggtggacggattccgcactggacaagatcagatcagatggattgatcagtgaggac
agcattcattcggagaatgccacccgtgtggtggagctgcttctgggttcacaggttacg
gtggcattggtggcgaattttgcactcaatgtatttattctactcatcctatgtcttaag
actgtattctttgtgcagctatacccttctgagactcggaaagtggtggaacgtctcgtc
aactatgttgtttacaagggaatgtttctcccgttggtggtgcctcctaccatatttcaa
gcagccttgtggtcaacttggttaacagttctttgttccttaaagatgtttcaatcattg
gcaagagaccggctcgagcgattgaatgcatccccttctgcaactccatggacatatttt
cgtgttttttctgtcttattgttggttctctctattgatatattttggataaggttgtgt
atgataatatacagggcattaggttctaatattcttctgctgttattctttgaacctctc
agtatggcctttgagacgctacaggcgattatgattcatggatttcagctccttgacctg
tggcaccgccattcagtggatggcagtgcagattgccaacgatcccatctgtttgataga
tcatcggctggttctttatgggaatggaagggcattcttcttcggaacttaggatttttc
ttagacttgatgaccttgctaatggcacttgggcattacttgcacatttggtggcttcat
ggcatggcattccatttggtggatgccgtcctcttcctgacttttcgtgctttggtaagc
gctattgtaaagcggatcaaaggatttgtcaagttgagaatggccctaagtacacttcat
ggggcacttcctgatgcttcatctgaagagctgcgtacatataatgatgaatgtgccatt
tgtagagaaccaatggctagagctaaaaagctagcctgcaatcacctttttcatcttgcg
tgcttgaagtcgtggttggatcaaggcctaaacgaggtgtattcatgcccgacctgtcga
aggccactctttgtgggtagcactggagataatatgacttctcgtgctggagatctcttg
aatgatgagcaacttgccagacgaataagttcagggttggaccaacaaagtgcagctgga
catgcccttcctattggtgcattttctaaccaacaacagaaccctactgacagtagtgtg
tggagaggagtcgatcaaagttgggcgcatccttggccaggcccaggatcggatggtgcc
ggtccatctactgcaattagatccgttggattcggcagagtccagatgatgatgaggcat
ctgacatctgtaggcgaaacctatgcccatactgcacttgaagatactgcttggagcctt
tggcccatgacccatcctcaggcaccctcaagttcctccattcctcccgtgttgcctgct
gccagatacaatggaaacatgggcggtttacgttttaggagtacttcaccatctgcaagt
ggaaacttatcaggcatacttgccatggcagaaacagtacgggaggtgttgccccacatc
ccagatgaaataattattcaggatttgcaacaaaccaactcagtagctgttactgtgaac
aatcttcttcacatgtga
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