Magnolia sinica: 131233954
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Entry
131233954 CDS
T09699
Name
(RefSeq) LOW QUALITY PROTEIN: probable helicase CHR10
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msin03036
]
131233954
Chromosome and associated proteins [BR:
msin03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
131233954
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
131233954
NCBI-ProteinID:
XP_058086831
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All DBs
Position
18:complement(10727304..10755533)
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AA seq
891 aa
AA seq
DB search
MFKWNDLPCTKMDYEQRLKAAAHFIISNDRSRMEEDLNCTDLGISATLKPHQVEGVSWLI
RRFTLGVNVILGDEMGLGKTLQAISFLSYLKVHQMSPGPFLVLCPLSVTDGWMSEFTNFC
PTLRVLRYVGDKGLRCDIRRTIYEHVKQQLPSSDVKSALPFDVLLTTYDIALLDQDFLCQ
IPXHYAVIDEAQRLKNPSSVLYNVLEQCFLMPRRLLMTGTPIQNNLSELWALMHFCMPSI
FGTLEQFISTFKEAGISSAGHDAAKVKEQFKILKYILRAFMLRRTKSMLIERGTLMLPAL
TEITVMSPLVPLQKKVYMSILRRELPALLALSSGASSHQSLQNMVIQLRKACSHPYLFNG
IEPEPYEEGEHLVQASGKLIVLDQLLQKLHSAGHRVLLFAQMTHTLDILQDFLELRKYTY
ERLDGSIRAEERFAAIRSFSQQLVKGTSKTQANQHGAFVFMISTRAGGVGLNLVAADTVI
FYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVSAHTVEEVIMRRAERKLHLSRNAVGED
DTHGEGKEAGAEAGDLRSLIFGLHMLDPTDIDESSGGVNMVELNAMAEKVIEMRTHEPSD
RGDENDRKFEINPKDLLNRDDISAKSSSMSVSFDPGLDEASYLSWIGKLKEASQSIEAST
VELGRKRNPSETRHHKHEADQKKAEEKKLKWEALGYQSLAIKDPVWVMDGDIMSDSGSVE
FVYGDCTKPTKVCPSELTIIFSCIDNCGNWGRGGMFDALANLSASIPDAYQRAFECGDLH
LGDLHLVKINEVNGENNTDGNTPQWVALAIVQSYNPRRKVPRSNISLPDLEQCLLKASFS
AAQNSASIHMPRIGYQDGSDRSNWYVVERLLRKYVSIYGIKIFVYYFRRPS
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaatggaatgacttaccttgcacgaaaatggactacgagcagaggctcaaagca
gcggcccacttcatcatctcgaatgaccgcagccgaatggaagaagatttgaactgtaca
gatttgggtatctctgctacgttgaaaccccaccaggtcgaaggagtttcttggcttatc
aggagattcaccctcggagtcaacgtcatcctcggagacgagatgggcctcgggaagact
ctgcaagccatctctttcttgagttatttgaaggtccaccagatgtcccctgggccattc
ttggtattatgtccactcagtgtgacagatggttggatgtctgaattcaccaacttctgt
ccaactttgagggttcttaggtatgttggcgataagggactccgctgcgatataaggagg
acaatatatgagcatgtaaagcaacaattgccatcatctgatgtaaaatctgctttacca
tttgacgtgttgttgacaacttatgacatagcattgttggatcaagattttctttgtcaa
attccgtagcactatgcagtaattgatgaagctcaacggcttaaaaatccttccagtgtt
ttatacaatgtacttgagcaatgttttctcatgccaagacggttattgatgacaggaact
cctatccaaaataacctttctgagctttgggctttgatgcatttttgcatgccgtcaatc
tttgggacattagaacagtttatttccacattcaaggaagctggaatttcttcagcaggt
catgatgcagctaaagttaaggaacagttcaaaattttaaaatatatattgagagcattt
atgcttcggcgaacaaaatcaatgctcattgagaggggaactctcatgctaccagctctt
acagagattaccgtgatgtctccactagttcccctgcaaaagaaagtctatatgtcaata
ttgaggagagaacttcctgcacttcttgcattatcctcgggagcatcaagtcatcagtca
ttacagaatatggtaatacagcttcgaaaggcatgcagccacccttaccttttcaatggt
attgagcctgaaccttatgaagaaggcgaacacctggttcaggctagcgggaaactaatt
gttttggaccagctacttcagaagctccattctgcagggcaccgtgttcttctttttgct
cagatgacacatacacttgacattcttcaagattttctagagttacgcaagtacacttat
gagcgtcttgatggatctattcgggcagaggagaggtttgctgcaataagaagtttcagc
cagcaactagttaaaggcacgtcaaaaactcaggctaatcaacatggtgcatttgtcttt
atgatttcaactcgagcaggaggagttggtctgaatcttgttgctgctgatactgtcata
ttttatgagcaagattggaatcctcaggtagataagcaagccctgcagcgagcccaccgc
attggacaaatgaatcatgtcctgtctataaacctagtgtcagcacatactgtggaggag
gttatcatgcgaagagcagagaggaaattgcatctaagtcgtaatgcggttggagaggat
gatactcatggggaagggaaagaagcaggagctgaagctggtgacttgcgatctcttata
tttgggttacatatgcttgaccccacagatatcgatgaaagctcaggtggagtgaatatg
gtggaactgaatgcaatggctgaaaaggtaattgaaatgcgcactcatgaaccatcagac
aggggtgatgaaaatgaccggaaatttgagattaatccgaaggatttgttgaatagagat
gatatatccgcaaaaagcagttctatgtcagttagttttgatcctggtcttgatgaggct
tcatatctgtcatggattggaaagttaaaagaagcatcacaatcaattgaagcttccact
gtggagttgggaaggaaaagaaacccatctgaaacaaggcatcataaacatgaagctgac
cagaagaaggcagaggagaagaagttgaagtgggaagctcttggttaccagtcattagcc
atcaaagaccctgtttgggtcatggatggtgacataatgtcagattcaggatctgtggaa
ttcgtttatggagattgtacaaaaccaacaaaagtttgcccatctgaactgaccataatt
ttcagttgtattgataactgtgggaattggggtcgtggaggaatgtttgatgcactagcc
aatctttctgcgagcatcccagatgcatatcagcgggcttttgaatgtggggaccttcac
ctgggtgacttacatcttgtaaaaatcaatgaggtcaatggtgaaaataacacggatgga
aatactccacagtgggtggctctagccattgtacaatcatacaaccctcgccgtaaggtt
cctcgtagcaatatctctttaccagatttggaacaatgcttactgaaggcatctttctca
gctgctcagaactctgcatcaattcatatgccaagaataggctatcaggatggcagtgac
cgttcaaactggtacgtggtagaacgccttctgcgaaaatatgtgtccatctatggcata
aagatttttgtgtactatttcagacgcccatcttaa
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