Magnolia sinica: 131233962
Help
Entry
131233962 CDS
T09699
Name
(RefSeq) general negative regulator of transcription subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
msin
Magnolia sinica
Pathway
msin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131233962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131233962
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131233962
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
131233962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
Motif
Other DBs
NCBI-GeneID:
131233962
NCBI-ProteinID:
XP_058086843
LinkDB
All DBs
Position
18:complement(69456280..69563958)
Genome browser
AA seq
880 aa
AA seq
DB search
MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKVCEKETKTKAFSKEGLGQQPK
TDPKEKAKSETRDWLNNVVGELESQIDYFEAEIEGLSVKKGKMRPPRLTHLEASIVRHKA
HIIKLELILRLLDNDELSPDQVNDVRDFLEDYVERNQEDFDEFSDVDELYNSLPLDKVES
LEDLVAIVPPALVKGIVPIASASAVLSLKPSSPASPSQSSAMLASAAQQGTLIQDQAEET
ASQDSNSDIGPSTPSKNGTCGCSVLSTTSTTGPGMPTGTNTTPATGSIPTHNLAGGSTAS
AILSGPGYALGVVENVTNAASSSPINLTTLVKEDDNASFPGGRSSPALAEIGTGRGIGRG
SVVGGIANQTSTVSLNLSSGTGLPSSETLGAVLAVSDISKRNILGSDERIGGGGLVQPPV
SPISNRMLLQQTSKSSDGAGTTDSNNVGEVSVIGGRVFSLPLVSGGQWRSHSPSSFQNQN
ETGQLRGRTEIAPDMQLFQQVQQQGHSTGLGASHLAGTNPKQFPTQQQNSLLQQQNSMHQ
QSAQHALMSAGAKDADAGQVKAEAQQQQQNSSNDLSMEPATNFGVNKSLMNEVDLKADMP
AGVSGSSAEATQVPRDTDLSPGQPLQSNQSSVSLGVIGRRGFSDLGAIGDNLSASIGNSG
GMHDQSYNLQMLDASYYKLPQPKDSERAKNYVPRRPVKTPPSYPQVQAPIVDNPAFWERL
GLDTLGTDTLFFAFYYQQNTYQQYLAARELKKQSWRYHRKYNTWFQRHEEPKVTTDEYEQ
GTYVYFDFHIADDDLQHGWCQRIKTEFTFEYSYLEDELVV
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgagccggaaactgcagggcgagatcgatcgcgtcctgaaaaaagtccaggaa
ggcgtggatgtcttcgacagtatctggaacaaggtttatgacactgataatgcgaaccag
aaggagaaattcgaggcggatttgaagaaggagattaagaagctgcagaggtacagagat
cagatcaagacatggattcagtcgagtgagataaaggacaagaaggttagtgcctcttat
gagcaggctctgctggatgctcgaaagctcatcgagcgtgaaatggaaagatttaaagtt
tgtgaaaaggagactaaaacaaaagcattctccaaagaagggctaggccaacaacctaaa
actgatcctaaagagaaggctaaatcagagacaagggattggctaaacaatgtggttggg
gagctggagtctcagattgattactttgaagctgagattgaggggctttcagtgaagaaa
ggaaagatgaggcctcctcgattgacacatttagaggcatccattgttcggcataaggct
catataataaagctagaattgattttgagactgctggataatgatgaattaagtccggat
caggttaatgatgttagagatttcctagaagactatgttgaacgcaatcaggaggatttt
gatgaatttagtgatgtcgacgagctttacaactctttaccgttagacaaagtggaatca
cttgaagatctggttgcaattgttcctcctgctcttgtaaagggcattgttcctattgct
tctgcctctgcagttttaagtttaaagccttcttcaccggcttccccctcccaatcatct
gccatgttagcatctgctgctcaacagggtactttgattcaggaccaagctgaagagaca
gcttcccaggacagtaattctgatattggtccaagtactccatctaaaaatggcacgtgt
ggttgttcagtattatccactacctccacaactggccctgggatgcctacagggactaat
actacccctgccactggcagcatccccacacataacttggctggtgggtcaactgcttca
gcaatcctttctggtccaggatatgctctaggtgttgtggagaatgtaactaatgctgct
tcgtcatcgcctataaatttgaccactttggttaaggaggatgataatgccagcttccct
ggaggaagatcatctcctgctcttgctgaaattggaacagggaggggcattggtagaggg
tctgtggttggagggatagccaaccagacgtctactgtttctttgaatctgagttctggt
actggcttgcctagcagtgaaacccttggtgcagtgcttgcagtctcagacatttcaaag
agaaacatattagggtcagatgagagaattggaggtggtggtcttgtacaaccaccagtt
tcccccatcagtaatagaatgctcttgcagcagacttcgaagtctagcgatggggcaggt
acaactgattctaataatgttggtgaggtttctgtgataggtgggagagttttctcactt
ccactggttagtggagggcaatggagatctcatagtccaagttcctttcagaaccagaat
gaaacggggcagcttcgtggaagaactgaaattgcccctgatatgcagctgttccaacaa
gtgcaacaacaaggtcatagtaccggactcggtgcgtctcatcttgctgggacaaatccc
aaacagtttccaacccaacaacaaaactcactcttacagcagcaaaattccatgcatcaa
cagtctgctcagcatgcactgatgtcagctggagcgaaagatgcagatgctggccaggtg
aaagcagaagcccaacagcaacaacaaaattcatctaatgatttgagcatggaacctgct
actaattttggagtaaataagagtctcatgaatgaggttgatttgaaagcagatatgcct
gctggagtttctggctcttcagcagaagctacccaagtaccgagagataccgatctctct
cctgggcaacctttacaatcaaatcaatcttcagttagccttggtgtcattggtcgaaga
ggcttttctgatctcggtgccattggcgataacctcagtgcctcaattggaaattctgga
ggtatgcatgatcagtcatataatttgcagatgcttgatgcttcatattacaagcttcct
caaccaaaagattcggaacgtgcaaagaactatgttccaagacgccccgtgaagactcca
cccagctatcctcaagtgcaggctccaattgttgacaatcctgctttctgggaacgatta
ggtcttgatactttgggcacggacacccttttctttgcattttactatcaacagaatact
taccagcaatacttagctgcaagagaactgaaaaagcaatcctggagataccaccggaag
tacaacacatggtttcaacggcatgaagagccaaaagtcacaactgatgaatacgagcag
ggaacttatgtgtactttgatttccatattgcagatgatgacttacagcatggctggtgc
caaaggatcaagactgagtttactttcgagtacagttatcttgaagatgagcttgttgta
tag
DBGET
integrated database retrieval system
