KEGG   Magnolia sinica: 131234300
Entry
131234300         CDS       T09699                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
msin  Magnolia sinica
Brite
KEGG Orthology (KO) [BR:msin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:msin03009]
    131234300
Ribosome biogenesis [BR:msin03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    131234300
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 EIF3I NBCH_WD40 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_WDR75_2nd Beta-prop_IP5PC_F Beta-prop_Vps41 Beta-prop_VPS8 Beta-prop_LRRK2 Beta-prop_WDR75_1st WDR54 Beta-prop_SCAP Beta-prop_DCAF12 Beta-prop_WDR19_1st PEP5_VPS11_N Beta-prop_BBS7 VPS8_N
Other DBs
NCBI-GeneID: 131234300
NCBI-ProteinID: XP_058087057
LinkDB
Position
19:complement(8249606..8267294)
AA seq 452 aa
MAELDELVLASSPRDAGISCWDLRSGAELLRYRSCSSPPHGLASIGCRFLVSSQLQDSSS
STPSLLYWSWNKPQPEVRSFPVEPIKPVVSNSDGTYIIGGALSGHIFLWEVASGTLLKKW
HAHYRAVTCLVFSDDESLLISGAEDGHIKVWSLYRLFDDMGDTMNQSPYEHVFSEHTLHV
TDIVAGYGGCNAIILSSSEDRTCKVWSLSKKKLLRTIVFPSIINAVALDPGEYAFYAGGR
DGKIYIGALSAESSTNSTYGMHIIGSLSGHSKAVTCLAFSLDGISLISGSEDGTFRVWDT
KARHVNRIFKHAKGPINNILVLRKPLPSSPKTSRNTQGSVSRRHLLSTLPPPLDKYINSM
DGDDGTRAVRAVLAPRDESLDSQFLSSHVMINQIKELQQQGSSAATEVELERLREDCKRS
LQMVQKWKKMYQDLLRLSINELLDEDQKGGNA
NT seq 1359 nt   +upstreamnt  +downstreamnt
atggcggagctggacgagttggtactcgcctcatctcctagagacgctggaataagctgc
tgggatttgcgttctggagcagagttgcttcgttaccgttcctgctcttccccaccccat
ggcctcgcctctatcggatgtcgattcctcgtctcttctcagctccaagattcttcttct
tccaccccttcccttctctactggtcctggaacaagcctcagccagaggttagaagcttt
cctgttgagccaatcaaacctgttgtttctaattcagacggcacatatattattggtgga
gcgttatctgggcacattttcttgtgggaggtggcaagtggcacacttcttaagaagtgg
catgctcattatcgagctgtcacttgcttagtattttctgatgacgaatcactactaatt
tcgggagcggaggatggacacatcaaagtttggtccctttacaggctgtttgatgatatg
ggagacacaatgaaccaaagtccctatgaacacgtcttttctgaacatactttgcacgtg
actgacattgttgcgggttatggaggatgtaatgcaattatcttgtcttcttcagaggat
cgcacgtgtaaggtttggagcttgtctaagaagaaattattgagaaccattgtgttccct
tctataatcaatgcggttgcactagaccctggggaatatgcattttatgctggcggtagg
gatggcaaaatatatatcggcgcgcttagtgctgaaagctccacaaacagcacttatgga
atgcatatcattggttcattatctggtcacagtaaggctgttacttgcttggcatttagc
ttggatggaatttcactaatatctggatctgaggatggcacatttcgagtttgggacact
aaagcccgtcatgtcaatcgtatattcaaacatgcaaaaggtcctatcaataacatcctt
gtacttagaaagccactaccctcaagtcctaagacatcaagaaatacacaaggctctgta
tctaggaggcatctattgtcgacattaccgccacctctggataaatatatcaattcaatg
gatggtgatgatggcactagggctgttagggcagttcttgctcctcgtgatgaatcattg
gatagtcaattcctcagttctcatgtgatgataaatcaaatcaaagagcttcagcaacag
ggttcttcggctgcaacagaagtggagttggaaagattaagggaagactgcaaaagatca
ctgcaaatggtccaaaagtggaagaaaatgtatcaagacttgcttcgtctcagcataaat
gagctgttggatgaggaccaaaagggaggaaatgcctga

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