Magnolia sinica: 131234402
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Entry
131234402 CDS
T09699
Name
(RefSeq) uncharacterized protein LOC131234402
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msin03016
]
131234402
Enzymes [BR:
msin01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
131234402
Transfer RNA biogenesis [BR:
msin03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
131234402
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TraT
TRAM
Motif
Other DBs
NCBI-GeneID:
131234402
NCBI-ProteinID:
XP_058087231
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Position
19:complement(17425323..17449483)
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AA seq
624 aa
AA seq
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MEDIEDVVAGGPPPGLRLPLTGVGMKPKKPKARKIQGPPLLTPSPEIPGTQTIYMKTFGC
SHNQSDSEYMAGQLSAFGYAISDNPEEADLWLINTCTVKSPSQSAMETLISKCKSARKPL
VVAGCVPQGSRDLKELEGVSIIGVQQIDRVVEVVEETLKGHEVRLLNRKTLPALDLPKVR
KNKFIEILPINVGCLGACTYCKTKHARGHLGSYTVNSLVERVRTVISEGVKEIWLSSEDT
GAYGRDIGVNLPNLLNAIIAELPPDRSTMLRVGMTNPPFILEHLKEIAKVLCHPCVYSFL
HVPVQSGSDSVLSAMNREYTVSEFRTVVDTLNQLVPEMQIATDIICGFPGETDDNFAQTI
SLIKEYKFPHVHISQFYPRPGTPAARMKKVPSTEVKKRSRELTSIFESFTPYQGMEGRIE
RIWITEIATDGIHLVGHTKGYVQVLVIAPESMLGTSTDVKITSVGRWSVFGEVIETPNQM
KEVSQQMRTPKECHPCSDSDVNCVCSREPEPCACDVQSCGGKGCENGCCKTPDVFAVVGS
ANIMDDMPIKDRNGRKLIGSLGSLILRKGKINRTEEKLEVGHSLESKEKQGNVGKGKLSV
VDWALLGGMIASLLTIIVLLFLSK
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggaagacatcgaagacgtggttgcaggtggccctccacccgggcttcgcctgcccttg
actggcgtcggtatgaagccgaagaagcccaaggcccgtaaaatccaaggcccccctctt
ctcactccttcccctgaaatcccagggacacagaccatatacatgaagacttttgggtgc
tcgcacaaccagagtgacagtgaatatatggctggtcagctttcagcatttggatacgca
ataagtgataatccggaggaggcagacctttggctaattaatacatgcactgtgaaatct
cctagccaatctgccatggagactctaatatcaaaatgtaaaagtgccagaaagccactg
gttgtggctgggtgtgttcctcaaggaagtagagatttgaaggagcttgaaggggttagt
ataattggtgtgcaacaaatagaccgcgtggttgaagtggtggaagagactttgaaaggt
cacgaggtgcggcttttgaatcgcaagacattgccagcacttgaccttccaaaggtgagg
aagaataaatttattgagattcttccaattaatgttggttgtttaggtgcttgcacttac
tgcaagacaaagcatgcccgggggcatctggggagctacacagtaaacagtcttgttgaa
cgtgtaagaactgttatatctgaaggagtcaaggagatatggttaagcagtgaagatacc
ggagcttatggtcgtgatattggagttaatcttccaaatttattgaatgctatcattgcg
gaacttccccctgatagaagtacaatgcttcgtgttggcatgactaatcctcctttcatt
cttgagcacttgaaagagatcgccaaagttttatgccacccctgtgtatattcatttctt
catgtgccagtccagtccgggagtgactctgttttgagcgcaatgaatcgagaatacact
gtaagtgagttcagaactgtggtagatactttgaatcaacttgtacctgaaatgcagatt
gcaactgatataatttgtggattccctggcgaaacggatgacaattttgctcaaactatc
agtcttatcaaggagtacaagttcccacatgttcatatttcacagttttatcctagacca
ggaacgcccgctgcgaggatgaaaaaagttccaagcacagaggtgaagaagcgtagtcgt
gaattgacttctattttcgaatcattcacaccatatcaaggaatggaaggtcggatagag
aggatatggataactgaaattgccactgatggcattcacttggtgggccacaccaaggga
tatgtgcaggtgcttgttattgctccagaaagcatgctaggcacttcaacagatgtcaag
ataacgtctgtggggaggtggtcagtgtttggtgaagtgattgaaactcccaaccaaatg
aaagaagtttctcaacaaatgcggactcccaaagaatgccatccatgctctgattctgat
gtgaattgtgtatgctcaagagagccggaaccctgcgcatgtgatgtacagagctgtgga
ggaaaaggctgtgaaaatggttgttgcaaaactcctgatgtttttgcagtggtgggaagt
gctaatatcatggatgatatgcctataaaagatcgaaatggtagaaagctcatcgggtca
ttaggatcactgatattgaggaaaggaaagataaacagaacggaggagaagttggaggtg
ggccattccttggaatccaaagagaagcaagggaatgtaggcaaaggtaagttgagtgtt
gtcgattgggctctgttaggtggaatgattgctagtttattgacaataatagttctcctg
tttctttccaaatga
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