Magnolia sinica: 131234690
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Entry
131234690 CDS
T09699
Name
(RefSeq) transcription factor IIIB 60 kDa subunit isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msin03021
]
131234690
Transcription machinery [BR:
msin03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
131234690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
BRF2-like_C_cyclin_rpt
DmmA-like_C
Motif
Other DBs
NCBI-GeneID:
131234690
NCBI-ProteinID:
XP_058087601
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All DBs
Position
19:complement(21086544..21135925)
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AA seq
642 aa
AA seq
DB search
MVWCKHCAEDHPTIRDYDNGYVCCSGCGRVIDQDVFVNDVSFVKTAGGQSQLAGSFIRSV
QSEYSVSHERTLMKGREEISDMVGSLCVSGGDSIINQAHAFYTIAVERSFTRGRRTALVA
ASCLYIACRQNEKAYLLIDFSEYLQINVYVLGAVFLQLCKLLRLEEHPIVQKPVDPSLFI
HRFTERLIGEKNFRVSKTALQIIASMKRDWMQTGRKPSGLCGAALYISALSHGLKYSKSD
IVSVVHICEATLTKRLIEFENTESGSLTIEEFITKSSELEGELQSKQQPSCGSKISGITE
VLCEHKDRGEPHFAHGLCRKCYDDFVELSGGLQGGSEPPAFQRAERQRMAEASSKEKSTE
QCLDTMPSQSKIHHKQNEKEVESSKLQQDVIKNKLDTSLKSEGAAKIKQAVNGVASDQSQ
AHQDTGSIGVDESESLSDIDDVEVDGYLHNEEEKRYKKIIWEEMNKEYLEEQAAKEAAAV
AAREAYAANFENCSGDMLAAQELAAAAAAAVAKSRKEKKQKRAEEAKNSKPAQTAAEAAR
NMLTKKRLSSKINFDVLDKLFDDSTNAENAKKQRVESDISNKADGQYKKKAGESEAIEND
DYGPKYGYGEDYDAGGGYGNDYSYYGNQDDGYGYDQGYGSDY
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggtctggtgtaagcattgtgcagaagaccatcctacaatacgtgattacgacaatggt
tatgtatgttgtagcggttgtggaagggttattgatcaggatgtctttgttaatgatgtt
agctttgttaaaactgctggggggcagagtcagttggcaggtagttttataagaagtgtt
cagagtgaatattctgtatcacatgagaggacattgatgaagggaagagaagaaattagc
gatatggttggcagtctatgcgtgagcggtggagattctataataaatcaggctcatgct
ttttatacgatagcggttgagcggagtttcaccagggggcgtaggacagcacttgttgca
gcttcgtgcctttacattgcttgccggcaaaatgagaaggcatatctcctcattgatttt
tcggagtacttgcagataaatgtttatgtgctaggtgctgtatttctgcagctttgcaag
ttgctaaggcttgaagaacatcccatagttcaaaaacctgttgatcctagcctttttata
catcgattcacagaacgtttaattggagaaaagaacttcagagtttctaagactgcgttg
caaattatagctagcatgaagcgagattggatgcagacagggaggaaacctagtgggttg
tgtggggcagcgctctacatatctgcactttctcacggactcaaatattccaagtcagat
attgtaagtgttgtgcacatctgcgaagcgacattgacaaaacgtctaattgagtttgag
aatacagaatcaggcagtttaacgattgaggaattcattacgaagtcaagtgagcttgaa
ggagagcttcaatcaaaacagcaaccaagttgtgggtctaaaatatctgggatcacggaa
gtgctttgtgaacacaaggaccgtggagagcctcattttgctcatggactctgtagaaag
tgctacgatgattttgtagaactttctggagggcttcaaggaggatctgaacctcctgca
ttccaacgtgctgaaaggcagagaatggctgaagcatcatctaaagaaaagtcaacagag
caatgtcttgataccatgccttcccaaagcaaaattcatcataaacaaaatgagaaagaa
gtggagtcttccaagcttcaacaagatgtaatcaagaacaaactagacacctctttgaag
tctgaaggggctgcaaaaataaaacaggcagttaatggcgttgcttctgaccaatcacaa
gcacatcaggacactggcagcataggagttgatgaatcagaaagcctttctgatattgat
gatgttgaggttgatgggtaccttcacaatgaggaggagaagcgttataaaaagattatc
tgggaagaaatgaacaaagagtatcttgaggaacaagcagcgaaggaagctgccgctgtg
gcggctagggaagcttatgctgccaattttgagaactgttccggagatatgctcgctgca
caggaacttgccgcagcagccgcagcagctgttgcaaaatcgagaaaggaaaagaaacaa
aagcgagctgaagaagcaaagaactcaaaacccgctcaaactgctgctgaagcagcacgc
aatatgctaacaaagaagaggcttagctcaaaaatcaactttgatgttttagacaaacta
tttgatgactcgaccaatgcagagaatgcaaagaaacagcgtgtcgagtcagatatcagc
aataaagcagatggccaatacaaaaagaaagcaggtgaatccgaggcaattgaaaatgat
gactatggtccgaagtatggatatggtgaagattatgatgctgggggaggctatggcaac
gactactcatattatggaaatcaagatgatggatatggttatgatcaaggttacggttct
gattattga
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