Magnolia sinica: 131235644
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Entry
131235644 CDS
T09699
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
msin
Magnolia sinica
Pathway
msin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131235644
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msin01009
]
131235644
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131235644
03036 Chromosome and associated proteins [BR:
msin03036
]
131235644
Protein phosphatases and associated proteins [BR:
msin01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
131235644
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
131235644
Chromosome and associated proteins [BR:
msin03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
131235644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
131235644
NCBI-ProteinID:
XP_058088894
LinkDB
All DBs
Position
19:complement(2536827..2554002)
Genome browser
AA seq
502 aa
AA seq
DB search
MMSSMKSSVALEWKFSQVFGERTPGEEIEYGDIISAIDFEKKGKYLAAGDNAGRVVLFEQ
TDGKDPRSWKELEHSDYPVTWHPEYRFKTEFQSHDPEVDYMMNLEIEGKINKVRWCATPN
DSAFILSANDRTIKLWKVVDRKVKKVKEMEHPSVCSENALLSEKSFMTGETEPSIPNGYR
LEWTNKVPKKEVPPHQEALAMISRIGEAAPARCRKVYAHAHDYNINSISTNSDGETFMSA
DDLRINLWNLEISDQCFNIIDMKPSNIEDLTEIITSAEFHPVYCNLLAYSSTRGFIRLVD
MRQSALCDQPARILHDHEGHGSRSIFTEIIASISDMKFAREGRHILSRDYMNIKLWDLHM
EGSPVATFKIHEYLRPKLSDLYNNDAIFDKFECCVSGDGLHFASGSYSNLFRIFSLGAGS
KEGITLEASKNPNRKQLPQTVKATRLLRSFTRGQSQTGHDGSSSDSNSFPCDLNSKLLHM
AWHPTTNLIACAAGNSLYLHHA
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtagtatgaagagctcggtagctctggagtggaagttctcgcaggttttcggg
gaacggacgcctggagaggaaattgaatacggtgatattatttctgcaattgatttcgag
aaaaaaggcaagtatctagctgctggggataatgctggtcgtgttgtccttttcgaacag
acggatgggaaagatccccgttcttggaaagagttggagcactcagattatcctgtcact
tggcatccggaataccgtttcaagaccgagtttcagagccatgatccagaggttgattat
atgatgaatttagaaattgaagggaagatcaacaaagtaagatggtgtgctacgcctaat
gattctgccttcattctatcagcaaatgacaggacgattaaactgtggaaggttgtggat
cggaaggtgaagaaagttaaagaaatggaacatccatctgtatgctcagaaaatgcactt
ctgtcagagaaaagtttcatgactggggagactgaaccctccatccctaacggctaccgt
ctggagtggacaaataaagtgcccaagaaggaagtcccaccacatcaggaagctctcgcc
atgatatctagaattggagaggctgcccctgcaagatgtcggaaggtgtacgctcatgct
catgattataatatcaactctatctcaaccaacagtgatggtgagacattcatgtctgcc
gatgaccttagaataaacttgtggaatttggagatcagtgatcaatgcttcaacatcatt
gacatgaagccgtccaacattgaggatctcacagagattataacatcagctgagttccat
ccagtctactgtaatctcctagcttacagcagcacgagaggtttcatccggttagttgac
atgcggcaatcagcattatgcgaccaacctgcaaggatattacacgaccatgaaggccat
ggatctcgatcaatttttacagagataattgcttctatctctgatatgaagtttgcaaga
gaaggaagacacatcttaagtcgtgattacatgaatatcaagctgtgggacttgcatatg
gaaggttcccctgttgcaacttttaagatccacgagtatctccgacctaagttgtctgat
ttgtataacaacgatgcaattttcgacaaatttgaatgctgcgtaagtggggatgggctt
catttcgcaagcgggtcgtatagcaatctctttcgaattttctctcttggtgctggaagc
aaggagggaatcacattggaagctagcaaaaatccaaacaggaagcagcttccccagaca
gtgaaagccacacgactgctgagaagcttcactcgtggacaatcccaaacaggacatgac
ggttcaagctccgacagcaacagttttccatgtgacttgaactcgaagttgctacatatg
gcatggcatccaactacaaacttaattgcttgtgcagcgggaaatagcttgtacttacac
catgcatag
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