KEGG   Magnolia sinica: 131235703
Entry
131235703         CDS       T09699                                 
Name
(RefSeq) DNA repair protein RAD5A isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
msin  Magnolia sinica
Brite
KEGG Orthology (KO) [BR:msin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msin03400]
    131235703
DNA repair and recombination proteins [BR:msin03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    131235703
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-RING_UBOX DEAD zf-RING_2 zf-C3HC4 zf-C3HC4_2 Prok-RING_4 zf-RING_5 ResIII zf-C3HC4_4 RING_XB3-XBAT31 E3_UbLigase_EDD zf-ANAPC11 SNX17-31_F2_FERM UBA_Rad5 SWI2_SNF2
Other DBs
NCBI-GeneID: 131235703
NCBI-ProteinID: XP_058088985
LinkDB
Position
19:complement(37556171..37605721)
AA seq 1037 aa
MGNKVRDELISSVRSVLGQEFSDMDIIRALHQANNDVTAAINIIFDMPHMSTRESVTPQK
NPSIEISSGSSLTPIPSSNSNSPVKTAKDGNRSRSLDFKSPGNGEVVVLEPEGKPSSSIN
SDWWFVGSSELSGLSTCKGRRLKAGEGVIFSFPSENRLNSPKFPGRGRSVSASSEIVRFS
TKESGEIGRIPNEWARCLLPLVKSRKVRLEGYCKYCPDVLSIMDTILLLVSVYINSSMFH
TCHQISLKSARHFTEDSVVHPLPTLFKLIGLTPFKKAEYTPEDLYTRKRPLDSKDSSGGH
MPILPLEKCRRSSLDVSEADNEEVTISDSDLDNIVGIADGSELEEMEPPNTLQCELRPYQ
KQALHWMVQLEKGSCLEEAARTLHPCWNAYHLADKRELVVYLNAFSGDATTEFPSTLQMA
RGGILADSMGLGKTIMTISLLLAHTERGGSGAYSASEGSSETSEVGGIVDQSPNPLKKIT
SISGFNKLMKSRISLIGGGNLIVCPMTLLNQWKAEIETHAQPGSFSLYVHYGQSRPKDAK
ILAQNDIVLTTYGVLASEFSAENAEDNGGLYSVRWFRVVLDEAHTIKSSKSQISMAAAAL
TADRRWCLTGTPIQNNLEDIYSLLRFLRVEPWGNWGLWQKLIQKPFEEGDERGLKLVQSI
LRPIMLRRTKSSTDREGRPILVLPPADVQVIYCELSEAEKDFYEALFKRSKVKFDQFVEQ
GRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEFSDLNKLAKRFLKGGQDAVHGEHNE
TPSRAYVQEVVEELRKGEKGECPICLEAFEDAVLTPCAHCLCRECLLASWRSATSGLCPV
CRKSITRQDLITAPTESRFQIDIEKNWVESSKVSVLMRELETLRSTGSKSIIFSQWTAFL
DLLQIPLSRNNVTFVRLDGTLNLLQREKVIKQFTEENEILVLLMSLKAGGVGINLTAASN
AFVLDPWWNPAVEEQAVMRIHRIGQTKRVSIKRFIIKGTVEERMEAVQARKQRMISGALT
DQEVRNARIEELKMLFT
NT seq 3114 nt   +upstreamnt  +downstreamnt
atggggaacaaggtcagagatgaattaatctcgtccgtccgatccgtcctcggccaagaa
ttctcggacatggacataatccgggctctccaccaggcgaacaatgatgttaccgctgcg
atcaacatcatctttgacatgcctcacatgtccacacgagaaagtgtcactccccagaag
aatccctccattgaaatctcatctggatcctccctcactcccattccaagttcgaattca
aattcacctgtgaaaaccgccaaagatgggaaccggagccggtcattagatttcaaaagt
cccggcaatggtgaagtcgtagttcttgaacctgagggcaagccttcgagttcaatcaac
agtgattggtggtttgtcggaagctctgaactctctggactgtctacttgcaaggggagg
agactcaaggccggtgaaggagtgatcttttcgttcccttctgaaaaccgcttgaattcg
cctaaatttccaggccgagggcgctctgtgtctgcttcctcggaaattgtgcggttctca
acgaaagagtcaggagagattggccgcattccaaatgagtgggcccgctgccttttgcca
ctagtaaagtccaggaaggtccgacttgagggatactgtaaatactgcccggatgtcctc
agtatcatggacacaattcttttgcttgtcagtgtatacatcaatagttctatgttccat
acctgccaccagatttcactgaagtcagcccgtcatttcactgaggattcagttgttcat
ccacttccaaccttgttcaaattgattggattgaccccttttaagaaagcagaatatact
ccggaggatctttatactaggaaaaggcccttggattccaaggacagttctggaggtcat
atgccaatattacccttagagaaatgccggaggtcatctcttgatgtcagtgaagcagac
aatgaggaggtgactatttcagattctgacctggataacattgtgggtattgcggatggt
tctgagcttgaggaaatggaaccaccaaatactctccagtgtgaactccgtccttaccaa
aaacaggctcttcattggatggtccaattggagaaaggaagctgcttggaggaagctgcc
agaactcttcacccatgttggaatgcatatcatcttgcagacaagagggaacttgtagtc
tatttgaatgcattttcaggagatgctacaactgaatttcccagcactctccaaatggcg
agaggaggaattttggcggattcaatgggacttgggaagaccattatgacaatctctctc
ttgctggctcatactgaaagaggtggttctggtgcatactctgcgagtgaaggctccagt
gaaactagtgaagtggggggaattgttgaccaatctccaaatcctttaaagaaaataacg
agcatttccggtttcaataagctgatgaaatctaggatttctcttataggtggtggcaat
ctgattgtttgccctatgacgctgctaaaccagtggaaggcagaaattgaaactcatgct
cagcctggatccttttctctttatgttcattatgggcaaagcagaccgaaggatgcaaag
attttggcacagaatgatattgttctcacaacttatggtgtattagcatcagaattttca
gctgagaatgcagaagacaatggtggactttattccgttcgatggttcagggttgtgctt
gatgaagcacatacaataaaatcttctaaaagccaaatttccatggctgcagctgcatta
actgctgatcgtcgctggtgtcttactggtactccaattcagaacaacttggaggacatt
tatagccttcttcgatttttgagggtggaaccttggggaaactggggcctgtggcaaaag
ctcattcagaagccttttgaagagggtgatgaacgtggcttaaagctggtccaatccatc
ttaaggccaataatgttaagaaggacaaaatccagcacagatagagagggcaggccaatt
cttgttctccctccagcggatgttcaggttatttattgtgaactgtcagaagctgagaag
gacttctatgaggctctatttaaaagatctaaggtcaaatttgaccagtttgttgagcaa
ggaagagttcttcataattatgcttccattttggagttgcttttgcgtctccgccagtgt
tgtgatcatccatttcttgtgatgagtcggggtgatacacaagaattctcagatctgaat
aagcttgcaaagcgcttccttaaaggtggtcaagatgccgtacatggggaacacaatgaa
acaccttcaagggcatatgtccaagaggttgtggaagagctccgtaaaggagaaaaagga
gagtgcccaatttgtcttgaagcttttgaagatgcggtattgacaccttgtgctcactgc
ttgtgccgggagtgcctcttggcaagttggcggagtgctacatctggtctttgtcctgtt
tgcaggaaatccattacaagacaagatcttattactgctcctacagagagtagatttcaa
attgatattgagaagaactgggtagaatcctcaaaagtttccgttcttatgagagaactg
gaaacccttcgttcaacaggctccaaaagtattatctttagccagtggacggcttttctt
gaccttctgcaaattcctctttctcgtaataatgttacatttgttcgtttggatgggact
ctaaaccttcttcaacgggaaaaagtaatcaagcaatttactgaagaaaatgagattttg
gtgttactaatgtcattgaaggctgggggcgtaggaataaaccttacagcagcatcaaac
gcctttgttttagatccatggtggaacccagctgttgaggagcaagctgtcatgcgcatt
catcgtattggtcaaactaaaagagtttcaatcaaacggttcatcattaagggaacagtg
gaggaaaggatggaagccgtgcaggcccggaagcaacggatgatctcaggggccctaact
gatcaggaagtccgcaatgcacgtatcgaggagctgaaaatgctctttacttga

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