Magnolia sinica: 131236303
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Entry
131236303 CDS
T09699
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
msin
Magnolia sinica
Pathway
msin03440
Homologous recombination
msin03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131236303
03460 Fanconi anemia pathway
131236303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msin04121
]
131236303
03036 Chromosome and associated proteins [BR:
msin03036
]
131236303
03400 DNA repair and recombination proteins [BR:
msin03400
]
131236303
Ubiquitin system [BR:
msin04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
131236303
Chromosome and associated proteins [BR:
msin03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
131236303
DNA repair and recombination proteins [BR:
msin03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
131236303
FA (Fanconi anemia) pathway
Downstream FA components
131236303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
DUF3806
Motif
Other DBs
NCBI-GeneID:
131236303
NCBI-ProteinID:
XP_058089398
LinkDB
All DBs
Position
Unknown
AA seq
1210 aa
AA seq
DB search
MIWENGWTAWINHMYVAHATLRLPIATSHLSFLSKKSNKDFSHNSLPPLRASLQNPLQYK
KTEKKKKRKKKKEKQAKMETTTTPELPTWTIVSDGGKHLEWSFSGRVPYGTSAQTPPQNL
INSLPSMSNFVLQESSKIIGDVGSDERDVPMFRTGWGKSVTVKQSSIRKALSVLGEGEIL
ERGSSKIIGESIVDDIPIFRTGSGKSVAVKQSSIRMALSVLGGGKILQGDQVHNAADHQC
HSSNSLFQTSSGKMVNISSAGLIRAKTLLGLEENYNPLTSQGPRDTKKQSGTNGLSGWGK
SQCVEKNASAILGTANIHSSGTLDASSFPKCPISCPRDKYSSGIGNQSKKDVLANLLNSD
TCRSSSEQPPVKFQTAGGRSISVSSDALQRARNLLGESDSGISPNEDDTYDPLFLLPREE
KTSNDNSLNKEDVSHASFLYQNATMNQYWGNRFPSHKGSMFNQKQSSYLLEATDSRDGIL
KHVDANGLASEGISRSNSNRGYMKRPPSDDLYATQMLVGNSSAKDLASQTIPATVPSGKP
LVEISNSKETTCANQKRITSEKRRLVKKSFTSPFKRPRSSIFSTPLKSSMSFPCTGSSAL
PTLEGSRCKRRVSTRYPFQVKRHTVKEFFGGPPCKTDSLTHLSNEIKYMNADSAEKYIFH
AASGLDGIGAEALRNMLAQCGASLLHATKEWVANHYKWIVWKLACLERGYPAHASGKFLT
VPNVLEELKCRYEREVNHGHRSAVKRILEGDASPASMVVLCISAICSYPDSDPEIAECPL
APYEYPKKITGWSGGGAENNHVAKIELTDGWYSFDALLDAPLTKQLVAGKLFVGQKLRIW
GAGLCGWVAPVSPLESSKTISLVMHINGTYRAHWADRLGFCKSIGAPLAFRCIKCAGGPV
PRTLVGVTRIYPILYKERLANGGFVVRSERMEARMMQLYNQRCSTIAEGIMSQTQDIFGS
HSNDDSDNEGAKIFKLLETAAEPEVLMADMSLEQLTSFATYQAKREAIRQSDMQKNVEKA
LNDAGLGGRQVTPLMRVRVVGLTAKCSQIKGCPREGLITIWNPTEKQQVSLVEGQIYCTG
GLVPLYSHANIIHFQARGSTTTWQHLPSSAVECFKPFFNPRKPILLSNLCEVPLASEFDT
AAVIVYVGDVYLSGNQKKQWVFVTDGSESGSELQSEGHSICLLAICFCSSITENDAFTPV
DHSILGSTVS
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgatatgggaaaatggatggacggcgtggataaaccacatgtatgtggcccatgcaact
cttcgacttccaattgcaacatcgcacctttcattcttatcgaaaaagtcaaataaagat
ttctctcataactccctccctcctttgcgcgccagtctgcaaaaccctttgcaatataaa
aaaacagaaaagaaaaaaaaaagaaagaaaaaaaaagagaagcaagcaaagatggaaacg
acgacaacgccagagctcccgacgtggacgatagtttcggatggcggaaaacacttagag
tggagcttttccggcagagttccctatggcacctcagcccaaaccccccctcaaaatctc
atcaattccctcccttccatgtctaattttgtgctccaagaatcttcaaagattattgga
gatgttgggagtgatgaaagggacgttccgatgttccgcactggatggggaaagtccgtc
acggtgaaacagtcttctattagaaaagcattgtcggttcttggagaaggagagatcttg
gagagaggatcttctaagattattggagaaagcattgttgatgacattccaatcttcaga
actggatcaggaaaatctgttgcggtgaaacagtcttctattagaatggcattgtctgtt
ctcggaggtggaaagattttgcagggtgaccaagtgcataatgctgcagaccatcaatgc
cactcctcaaattcacttttccagacaagctctgggaaaatggtaaacatatcgtctgct
ggtctcatcagagctaagacattgttggggttggaggagaactacaaccctcttacttct
caaggtcccagagacacaaagaaacaatcaggtactaatggattgagtggatggggaaag
tcgcagtgtgtggagaagaatgcgagtgcaattcttggaactgccaacattcatagtagt
gggaccttagatgctagttcatttccaaaatgtccgattagctgtccaagggataaatat
tcttctggaattggaaaccaatcaaagaaggatgtacttgcgaatcttctcaattctgac
acgtgcagatcttcttcagaacagcctccagttaagttccaaacggcaggtggaagatct
atatcagtttctagtgatgcattgcagcgtgcaaggaaccttcttggtgaatcagactcg
gggatatcaccaaatgaagatgatacttatgatccactgtttttgttgcctagagaagag
aaaactagcaatgacaattcactgaacaaagaggatgtttctcatgcttcctttttgtac
caaaatgctacgatgaaccaatattgggggaacagattcccatcccataaagggtcaatg
ttcaaccagaagcagtcatcctatcttctggaggctactgattctagggatggcatcctg
aaacatgttgatgcaaatggcttggcatctgagggcatctccaggtcaaacagcaataga
ggttatatgaaaaggcctcctagtgatgacctctatgcaactcaaatgttagttggaaat
tcttcagcaaaagatcttgcttcacaaacaattccggctacagtgccatcaggtaagcca
ctggttgaaatttcaaacagcaaggagacaacttgtgcaaatcagaagagaattactagt
gaaaaaaggagacttgtgaagaaaagctttacttctccattcaaaaggccccgtagttct
atattctccacccctttgaaaagtagcatgtcattcccttgcactggttcatccgcatta
ccgacactcgaaggttcccgttgcaaaagaagggtttccactcgatatccgtttcaggtt
aagaggcatactgtgaaggaattttttggagggccaccatgtaaaactgactctctgacc
catttatcgaatgagataaagtacatgaatgcggatagtgcagaaaagtacatattccat
gctgcatctggcttggatgggattggagcagaagcccttcggaacatgttggcccagtgt
ggagcttccttgctacatgccactaaagagtgggttgcaaaccattacaaatggattgta
tggaaacttgcatgccttgagagaggctatccagctcatgctagtggcaaattcttgaca
gtgcccaatgtgcttgaggaattaaaatgcaggtacgagagagaagtaaatcatggtcat
aggtctgcagttaagagaattttggaaggcgatgcatcacctgcttcaatggtagttcta
tgcatttcagctatttgctcctaccctgattcagaccctgagatagcggaatgccctttg
gcaccatatgaatatcctaagaagataactggctggagtggaggtggagctgaaaataat
catgttgcaaaaatagaactaactgatggttggtattcatttgatgcccttttggatgca
ccacttactaagcaacttgttgctggaaaattgtttgtgggccagaaacttcggatttgg
ggagcaggcttatgtggctgggttgcaccggtttcacccctagagtcatccaagacaatc
agtttggttatgcacataaatgggacatatcgagcacattgggctgaccggttgggattc
tgtaagagcattggtgcgccattggcttttaggtgcatcaagtgtgcagggggtccagtt
cccaggacattggttggggtgacacgaatttatcctattctatacaaggagaggttagct
aatggaggttttgtggtaagatcggaaagaatggaagctagaatgatgcaactatacaac
cagaggtgctctactattgcagagggcattatgtctcaaactcaggacatatttggttcc
catagtaacgacgatagtgataatgaaggggcaaaaatctttaagctccttgagacagct
gctgagcctgaagtcctaatggcagatatgagtttggagcaactgacttcatttgcaact
tatcaggcaaagcgggaggcaatcaggcagtcagatatgcagaagaatgtagagaaagcc
ctgaatgatgcaggccttggtgggagacaggtcacccccttaatgagagtaagggtggtg
ggcctaactgctaaatgttcccaaataaaaggttgtcctagagaaggcttgataacaata
tggaacccaactgaaaagcagcaggtcagtctggtggaggggcagatatactgcactgga
ggactagtgccactgtactctcatgctaatatcatccacttccaagcaagagggtctact
acaacttggcaacacttaccatcatcagcagttgaatgtttcaaaccattttttaatcct
cgcaaaccaatattattgtcaaatttgtgtgaagttcctctagccagtgaatttgataca
gcagctgtaattgtgtatgtgggggatgtttatttatccggaaaccaaaagaagcagtgg
gtgtttgtgacagacgggtctgaatcagggtctgagttacagtcagagggacattccatc
tgtttactcgctatctgcttctgctcatccatcaccgaaaatgatgcattcacaccggtt
gaccactctatattaggatccactgtaagttga
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integrated database retrieval system
