Magnolia sinica: 131236645
Help
Entry
131236645 CDS
T09699
Name
(RefSeq) putative DEAD-box ATP-dependent RNA helicase 29 isoform X1
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msin03009
]
131236645
Enzymes [BR:
msin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131236645
Ribosome biogenesis [BR:
msin03009
]
Eukaryotic type
Pre-60S particles
Helicases
131236645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
131236645
NCBI-ProteinID:
XP_058089941
LinkDB
All DBs
Position
2:23006017..23027710
Genome browser
AA seq
790 aa
AA seq
DB search
MVALHVSSKAELKRREKQKKKAKSGGFESLGLSSNVFRGIKRKGYRVPTPIQRKTLPLIL
SGADVVAMARTGSGKTAAFLIPMLHRLNQHLPQGGVRALILSPTRDLALQTLKFTKELGR
YTDIRISLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLAEIEGMSLRTVEYVVFDEAD
CLFGMGFAEQLHKILSQLSETRQTLLFSATLPSALAEFAKAGLRDPQLVRLDLDTRISPD
LKLAFFTLRQEEKHAALLYLIREQISSDQQTLIFVSTKHHVEFLNILFREDGIEPSVCYG
DMDQDARKIHISRFRARKTMLLIVTDVAARGIDIPLLDNVVNWDFPPKPKIFVHRVGRAA
RAGRTGTAYSFVTSEDMPYLLDLHLFLSKPVRPAPTEEEVLQDMDGVLSKIDQAIANGET
VYGRFPQTVIDLVADRVREIIDGCTELITLQKSCTNAFRLYSKTKPLPAKESIRRAKDMS
CEGLHPIFKNVLGSSELTAMAFSERLKAFRPKQTILEAEGEAAKAKHLRGPSSQWVDVMK
KKRAIHEEVINLVHQQRSSDQVAKMQDIKSDSIFPEEREIKEVRGSKRKAESFKDEEYYI
SSIPTNQHLEAGLAVKANEGFGSSRLEAAVLDLVADDSAGLQKQKSVYHWDKRGKKYIKL
NNGERVTASGKVKTESGAKVKAGKTGIYKKWKERSHNNISFNGMATDSNAEGTGLAANRR
MQGNNRHFKGANKYHAVPNAHVPSELRDPEQVRKRRQQKANRVSYMKSKSAKGKKYGKNG
KRGNRKSSKP
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggtggcactgcacgtgagctcgaaggcggagctcaagaggagggagaagcagaagaag
aaagcgaaatcgggcggcttcgaatcgctgggcctcagctctaacgtcttccgtggcatc
aagcgcaagggctaccgtgtccccacccctatccaacggaagacccttcccctcatcctc
tccggcgccgatgtcgtcgccatggcccgcaccggctccggcaagaccgccgccttcctc
atccccatgctccaccgcctcaaccagcacctcccccaaggcggcgtccgcgctctcatc
ctctcccccacccgcgacctcgctctccagaccttgaaattcaccaaagagctcggccga
tatacagacattcgtatcagcttgttggttggtggtgatagcatggaaagtcagtttgaa
gaacttgcacaaaacccagatattataattgcgacccctggtcggctcatgcatcatttg
gctgagattgaaggaatgtctttacgcactgtagagtatgtcgtattcgacgaagctgac
tgtctcttcggaatgggctttgctgaacagttgcataaaatcctttcgcagttgagtgag
acacgacaaacgctacttttcagtgcaaccttaccaagcgcccttgctgagtttgccaag
gctggtctgcgggacccacaacttgtgcggcttgatctggacacaaggattagccctgac
ctgaagctcgcctttttcaccttacgccaggaagaaaaacatgctgcgttgttgtattta
attagggagcagataagttctgatcagcaaactttgatatttgtctctacgaagcatcat
gtagagttcctcaatattctttttcgagaagacggcatagagccatctgtttgttatggt
gatatggatcaagatgctcgcaaaattcacatttcgcgatttagagctaggaagactatg
ctgctaattgtgacagatgttgctgcaaggggtattgatattccgttgcttgataatgtc
gtgaactgggacttccccccaaagcccaagattttcgtccatagagttggacgagctgcc
cgagctggtcgaactggtactgcgtattcatttgttacatcagaggacatgccttatctt
ttggatcttcatctatttctgtcaaagccagttaggcctgcacccactgaggaggaggtt
ctgcaagacatggatggagtattatccaaaattgatcaggcaattgcaaatggtgaaaca
gtctatggacgttttccccagactgttatagatcttgttgctgacagagttcgggaaatt
atcgatgggtgtacagagctgattaccttgcagaagtcgtgcacaaatgcatttcgcttg
tattcaaagacgaagcctctgcctgcaaaggaatccattagaagagcgaaggatatgtcc
tgtgaaggattgcacccgatttttaaaaatgtgctgggatccagcgagttaacagcgatg
gcattctctgagcgcttaaaagcttttagaccgaagcagaccatcttggaggctgaaggc
gaagctgctaaagcaaagcatttgcgaggtccttctagtcaatgggttgatgtcatgaag
aagaaaagggctattcatgaagaggtcatcaatttggtgcatcagcaacgatctagtgat
caggtggcaaagatgcaggacataaagtcggatagcatatttcctgaagaaagggagata
aaagaagttcgcggttctaaaagaaaggcagagagctttaaggatgaggagtactacata
agttcaataccgacaaatcaacatctggaggcaggtttagcagtaaaggcaaacgagggc
tttggatcaagcagactagaagctgctgttctggatctagtagcagatgacagtgctggt
ttgcagaaacaaaaatctgtttatcactgggataagagaggtaaaaagtacatcaagtta
aacaatggtgaacgtgtgacggcctctggaaaggtcaagacagagagtggtgcaaaggta
aaagctggcaagacagggatatacaagaaatggaaagaacggtcacacaataatatctct
tttaatggaatggccactgacagcaatgctgagggtactggtttagcagccaatcgtcgg
atgcaggggaataacagacacttcaaaggggcaaataaataccatgcagtgcctaatgcc
catgtgccatcagagctgagagatcccgagcaggtgcggaagaggcgtcagcaaaaggct
aatagagtatcttacatgaagagcaaatctgccaaggggaaaaagtatggaaaaaatggg
aaaagaggaaacagaaagtcttcgaagccatag
DBGET
integrated database retrieval system
