Magnolia sinica: 131236827
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Entry
131236827 CDS
T09699
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msin04131
]
131236827
04121 Ubiquitin system [BR:
msin04121
]
131236827
Enzymes [BR:
msin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131236827
Membrane trafficking [BR:
msin04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
131236827
Ubiquitin system [BR:
msin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131236827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-RING_16
zf-RING-like
zf-HC5HC2H_2
zf-HC5HC2H
Zf_IFT144_1st
Motif
Other DBs
NCBI-GeneID:
131236827
NCBI-ProteinID:
XP_058090280
LinkDB
All DBs
Position
2:28537940..28555882
Genome browser
AA seq
358 aa
AA seq
DB search
MSSDGNERPAVAPTAPKPYFCYQCDRTVSIFLPSPSSDLSCPICHGGFLEESQYPPEPNP
NPFFSSDDSLSPFGLPLFLSASSRGGFGLPPDLASLLNPTVIHRRSSSVGPTDPDVFNPL
LFLQNHLQTLMADGANIQFVIDGAPSNASLSSNLGDYFIGPGLEQLIQQLADNDPNRYGT
PPASKSAIETLPDIKISAELLESDSAQCAVCMDMFELGLVAKQMPCKHIFHPDCILPWLA
LHNSCPVCRYELPTDDLDYEQRTRGMPLPENLTSGNVATDSGSTGEGSEQGDSQRTVERR
FRISLPWPFRASGSPAETSSTSVGSGNNANVNEGETGSNSLDRGNQDLGSETRQEDLD
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccgacggtaacgaacggccggcagtggcccccaccgctccgaaaccctacttc
tgctatcagtgcgaccgtaccgtctccatcttcctcccttctccttcctccgaccttagc
tgccccatctgccatggcggctttctcgaagaatcccaataccctccagagcctaaccct
aatcccttcttctcctccgacgattctctgtcccccttcggattgcccctattcttatcc
gcctcctcccgaggcggcttcggtctccctcccgatctcgcctccctcctcaatcccacc
gtcatccaccgtcgatcatcgtccgtgggccccaccgaccccgacgtcttcaaccccttg
ctcttcctccagaaccacctccaaaccctcatggccgatggtgccaacatccagttcgtg
attgacggcgccccctccaacgcctccctctcctccaacctcggtgactacttcattggg
cctggcctcgagcagctcatccagcagctcgctgataacgatcccaaccgctatggcacc
ccacctgcctcgaagtctgctatcgagaccctccctgacatcaagatctctgccgagctg
ctcgagtcggattccgcgcagtgcgctgtctgcatggacatgttcgagcttgggttggtc
gcaaagcagatgccgtgcaagcatatcttccaccctgattgcatcctcccatggctcgcg
ctgcacaattcatgccccgtctgccgctatgagctgccgacggatgatctggattatgag
cagcggacgaggggaatgccactcccggagaatctgacgagtgggaatgtggccacggat
tcgggcagcaccggtgagggatcagaacagggggattcacagaggacggttgagcggagg
tttaggatctcgctgccctggccatttagggcttctggttcgcctgcagagacaagcagc
accagtgttggcagtggcaataatgctaatgttaacgaaggggagacgggttcaaactct
ctggatcgagggaatcaggatttaggctctgaaacccggcaagaagatttggattga
DBGET
integrated database retrieval system
