Magnolia sinica: 131236829
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Entry
131236829 CDS
T09699
Name
(RefSeq) nibrin homolog isoform X1
KO
K10867
nibrin
Organism
msin
Magnolia sinica
Pathway
msin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131236829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msin03032
]
131236829
03400 DNA repair and recombination proteins [BR:
msin03400
]
131236829
DNA replication proteins [BR:
msin03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
131236829
DNA repair and recombination proteins [BR:
msin03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
131236829
BRCA1-C complex
131236829
BRITE hierarchy
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Ortholog
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Gene cluster
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Motif
Pfam:
FHA
BRCT
Nbs1_C
PTCB-BRCT
Yop-YscD_cpl
BRCT_2
HTH_91
Motif
Other DBs
NCBI-GeneID:
131236829
NCBI-ProteinID:
XP_058090282
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Position
2:complement(28573744..28610825)
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AA seq
521 aa
AA seq
DB search
MVWGLFPAGAGGQKYYFFSKGTYKVGRKDCDVIIQNDRGVSRIHAELVVDAMTCRDPLQN
MSDSFLSDVRIKDLSKYGTFINKEKGSKAVNELPNKETTLKNGDLVLFGSGNAVFRFCFV
PLTLFIHSLKPSRAKPSLQDIISSIGGSATHTWNVECTHVIADESTSVTEDLINAILVQK
PVVRGDWVKVVADKNIQTELPSWSQYVPNLRLDGVTIKITAPEVREICLAGHTLVLGSSH
LYKFGAQLKSLLEMCSAKVVLVDEYCSSNGTLVEGASNSVVLVSPEGSLNEFNHFPQLIS
LPRVNDMKLVAAVLSGHFDPSIVESPSIAVSSQSTDETIVADSDAETDTVTSDHAAAVAR
SEAVKYEEKKEMSEDQADVVSEKKLSGFMVEDGGIKERKNKGDESETTGHQNSDIIYSQD
LIVKDLIMSAEAQSIANKTMVNFKCFRKRETPSGNSFKDLIPFSKDPYKESDLGNEEVAE
YVREEKKRKQKEAVAEDLFNSEKVKRRGAAGLTLRGLLTRG
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggtgtggggcttgtttccagccggcgccggtggacagaagtactatttcttttctaaa
ggaacctacaaagtaggtcgaaaagattgtgatgtgattattcaaaatgatagaggagtc
tctcgaattcatgcggagttagttgttgatgcaatgacttgtcgggatcctctacaaaac
atgtctgacagtttcctctcagatgttcgtatcaaggatttgtcaaaatatggtacattt
ataaacaaggaaaaagggtcgaaggcagtaaatgagttacctaataaggagacaactctg
aaaaatggggacctggtattgtttggatctggtaatgcagtcttcaggttttgttttgtt
cccctcacacttttcattcattccttgaagccctcccgagcaaagccttcccttcaagac
attatttcatctattggcggatctgccactcacacttggaatgtagagtgcacccatgtg
attgctgacgagtcaacatcagttacagaagaccttatcaatgccattttggtacaaaaa
cctgttgtccgtggtgattgggttaaggttgttgcagacaaaaatattcagactgaactt
ccgagctggagccagtatgttccaaacctgaggttagatggagtgacaatcaaaatcacg
gcacctgaagttcgggaaatctgtttggctggccataccttggtgttggggtcatcacat
ttgtataaatttggggcccagttgaagtcattactggaaatgtgcagtgcaaaagttgtt
cttgttgatgaatattgttcgagtaatgggacattggtagaaggagcaagcaattctgtg
gtgcttgtaagccctgaaggatcgctgaatgaattcaaccatttcccccaactcatttca
ctgccaagagtcaatgacatgaagttagttgctgctgttttatctgggcacttcgatcct
tctattgtggagtcaccttcgattgctgtctcttctcagtccactgatgagaccatagta
gcagattccgatgcggaaacggatactgtgacatctgatcatgctgctgcagttgcccga
tcagaagctgtgaaatatgaagagaaaaaggagatgtctgaggatcaagctgatgttgtg
tcagagaagaaactttcaggcttcatggttgaggatggtggtattaaagaaagaaagaac
aaaggtgatgaatccgagaccactggacaccaaaattcagacataatttatagtcaagat
ttgattgtcaaagatctcatcatgtcagctgaggcccagtctatagctaacaagacaatg
gtcaatttcaaatgcttcagaaagagagagactccctccgggaatagcttcaaagacctg
attccattctcgaaagacccatataaagaatctgaccttggaaacgaagaggtagctgag
tacgtgagagaagaaaagaagcgaaagcaaaaagaagctgttgcagaagacctattcaac
agcgaaaaggtaaagcgacgtggagcagctggtttgactctccgcggtctccttactcgt
ggctga
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