Magnolia sinica: 131237036
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Entry
131237036 CDS
T09699
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like isoform X1
KO
K04523
ubiquilin
Organism
msin
Magnolia sinica
Pathway
msin04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131237036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msin04131
]
131237036
03051 Proteasome [BR:
msin03051
]
131237036
Membrane trafficking [BR:
msin04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
131237036
Proteasome [BR:
msin03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
131237036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
Rad60-SLD
UBA
STI1-HOP_DP
UBA_7
RPN13_C
Rad60-SLD_2
XPC-binding
Dsc3_N
HEAT_HEATR1
Ubiquitin_5
UBA_HOIP
Motif
Other DBs
NCBI-GeneID:
131237036
NCBI-ProteinID:
XP_058090635
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All DBs
Position
2:complement(41968900..42005412)
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AA seq
557 aa
AA seq
DB search
MGADGDSVDAGDSSVSSNGIVTVHIRCSNGSKFSVQTGLDATVGVFKGILAENCDVPAEQ
QRLIYKGRILKDEQTLESYGLQADHTVHMVRGAAPPPPSTNTTNAANVGGPNSTPGVARG
VGSNESGGFGGAGLGGSLFPGLGFNGLGSNGASGLFGSGLPEFEQVQQQLTQNPNIMREI
MNMPVIQNLMNNPDLMRNLIMSNPQMREIIDRNPDLAHILNDPSTLRQTLEAARNPELMR
EMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATTMAGDTGSDLGSNPFAALLGNQ
GAAQARDRSPNPSTTGSETTTGSPAPNTNPLPNPWNNAAGGTQTNTNARSNLTGDARAPS
IGGLGGAGGLPDLERMLGGMQDPALLNQVMQNPAVTQMMQSLLSNPQYMNQLLGFNPQLR
SMLDSNSQLREMMQNPEFLRQMTSPEMMQQVLSLQQSLLSQLGRQQSTQEQGQTGGTTGA
PNSMGLELLMNMFGGLGAGGLSVPNPSNVPPEQLYATQLSQLQEMGFFDTQENIRALTAT
AGNVHAAVERLLGNLGQ
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgggcgctgacggcgattcggtcgatgcgggcgattcgagcgtcagcagcaacggcatc
gtcaccgtccacatacgatgctcgaacggctccaagttctccgttcagacgggcctcgat
gcgaccgttggggttttcaagggcattctggccgagaactgcgatgtcccggccgagcag
cagcgtctgatttacaagggtcggattttgaaagacgaacagaccctagaaagctatggt
cttcaggcagatcacactgttcatatggtccgtggggctgcaccaccacctccatctact
aatactacaaatgcagccaatgtgggaggtccaaacagcactccaggtgttgcaaggggt
gttggttccaatgaaagtgggggctttggaggtgctggccttggaggctcactgtttcct
gggcttggttttaatgggcttggtagcaatggagcatccggtttatttggatccggactt
ccagagttcgaacaagttcaacagcagctaacccagaaccccaacatcatgagggagatc
atgaacatgcccgtcattcagaaccttatgaataaccctgacctgatgcgcaacttgatc
atgagcaatcctcaaatgcgtgagatcatagatcggaatcccgaccttgcacatatactc
aatgatccgagcactctccgacagacactagaagcagctaggaatcctgagctcatgcgg
gagatgatgcggaataccgacagggccatgagcaacatcgagtcttctcctgaaggattt
aacatgctcaggcgcatgtatgaaactgttcaggagccattccttaatgcgacgacaatg
gcaggagacaccggaagcgatttgggatcaaacccatttgcagctcttttagggaatcaa
ggtgcagcccaggccagagatcgatcgccaaacccttccaccaccggttcagaaacaaca
actgggtctcctgcaccaaacaccaacccgctccctaacccatggaacaatgctgcagga
ggcacacagacaaacactaatgcaagatctaatctgactggggatgcaagggcacctagt
attggtggcttaggtggggctggaggtctgccggatctggaacggatgcttggtggcatg
caggatcccgctcttttgaaccaggtgatgcaaaatcctgctgtgacacagatgatgcaa
agcctcctctccaatccccagtacatgaaccagcttttgggtttcaatccccagctgcga
agcatgctggattccaattctcaactcagagaaatgatgcaaaacccagaatttcttcgc
cagatgacttcccccgagatgatgcagcaagttttgtctttacagcaatcgctattatcc
cagcttggtcggcaacagtcaacccaggaacaaggtcagacaggaggcaccacaggtgca
cctaacagtatgggattagagttattaatgaacatgtttggtggacttggtgctggaggc
ctcagcgttccgaacccatccaatgtgccaccggagcagttgtatgcgactcagctctcg
cagcttcaagaaatgggtttctttgacacccaagagaacatccgggcgctgactgccact
gctgggaatgtccatgctgcagtggagcgcctcctggggaatcttggtcagtag
DBGET
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