Magnolia sinica: 131237146
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Entry
131237146 CDS
T09699
Name
(RefSeq) histone-binding protein MSI1-like
KO
K10752
histone-binding protein RBBP4
Organism
msin
Magnolia sinica
Pathway
msin03082
ATP-dependent chromatin remodeling
msin03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131237146
03083 Polycomb repressive complex
131237146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msin03036
]
131237146
Chromosome and associated proteins [BR:
msin03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
131237146
Histone modification proteins
HAT complexes
HATB complex
131237146
HDAC complexes
Sin3A-HDAC complex
131237146
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
131237146
PRC2.2
131237146
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
131237146
Heterochromatin formation proteins
Other heterochromatin formation proteins
131237146
Chromatin remodeling factors
NuRD complex
131237146
NuRF complex
131237146
NuRF complex (fruit fly)
131237146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
MIOS_WD40
RMC1_N
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
131237146
NCBI-ProteinID:
XP_058090798
LinkDB
All DBs
Position
2:59468798..59509538
Genome browser
AA seq
394 aa
AA seq
DB search
MGGRRDIEEKALLADEYSVWKKNTPFLYDLVISHALEWPSLTIQWLPFSSVHRLILGTHT
SDGVPNFLMIADVDMPASSTTYAQPPSNPKVQISQRIHHDGEVNRARYMPQYPSVIATKT
NGSDLFLFNCNRHPPKPQSGSCDPDLRLKGHTNEGYGLSWSPLKEGFILSGSNDSKICLW
DINTMPQDKMLGAKTIYGVHEDVVEDVSWHLMNENLFGSVGDDKRLMIWDLRSSMSNSPQ
HSIVAHEKEVNSLSFSPFNEWFLATASSDKTVNLFDLRKLTTALHTFTSHTDEVFQVEWS
PKNETVLASSAADRRLIVWDLNRIGDEQTAEDAEDGPPELLFVHGGHTAKISEFSWNRNE
PWLISSVAEDNILQVWQMAESIYRDDLDVGTEGS
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaagaagagatattgaagagaaggcgctacttgcagatgaatacagcgtatgg
aagaagaacacacctttcctttatgatctggtcatctcccatgccctcgaatggccttcc
ctcaccatccaatggcttccattctcctccgtccatcgcctcatcctcgggactcacacc
tctgacggtgtccccaactttctcatgattgctgacgtcgacatgcccgcttcctctacc
acctacgctcagcctccctcaaaccctaaggttcagatatcacaacggatccatcatgat
ggagaagttaatcgggcccggtacatgccgcagtacccatctgttattgccaccaagacc
aacggctcggatctgtttcttttcaactgcaacaggcatccacccaagcctcagtcaggt
tcttgtgaccctgacctacgcttgaagggtcacaccaacgaaggatatggcttgtcatgg
agcccattgaaggaggggttcatattgagtggttctaatgactctaagatatgcttgtgg
gacataaatacaatgccacaagataaaatgctcggggcaaagactatatatggggttcat
gaagatgtggttgaagatgtgtcgtggcacttaatgaatgaaaatttatttgggtcagtt
ggggatgataaacgcttgatgatatgggatttgcgctcgtccatgtctaacagcccacaa
cattcaattgtagctcatgagaaagaggtgaactccctatctttcagtccatttaatgaa
tggtttttggcgacggcatcttcggataaaactgtcaacttgtttgacttacgaaagctg
acaacggctttgcacacatttaccagtcacacggatgaggtattccaggtagaatggagc
ccgaagaatgaaactgtattggcttccagtgctgctgatagaagattaatagtttgggat
ctcaacaggattggggatgagcagacagcagaagatgccgaggacgggccacccgagctt
ctatttgttcatgggggtcacactgccaagatctcagagttctcatggaaccgtaatgag
ccatggctcatctcaagtgttgcggaggataacattcttcaggtctggcagatggctgag
agcatttatcgcgatgatcttgatgttggcaccgaagggagttag
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