Magnolia sinica: 131237513
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Entry
131237513 CDS
T09699
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B
KO
K11267
sister chromatid cohesion protein PDS5
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msin03036
]
131237513
03400 DNA repair and recombination proteins [BR:
msin03400
]
131237513
Chromosome and associated proteins [BR:
msin03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
131237513
DNA repair and recombination proteins [BR:
msin03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
131237513
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
HEAT_EF3_N
HEAT_GCN1_C
HEAT_GCN1
PTM_DIR17_Tudor
Cnd1
BAHCC1-like_Tudor
Motif
Other DBs
NCBI-GeneID:
131237513
NCBI-ProteinID:
XP_058091316
LinkDB
All DBs
Position
2:122123205..122249525
Genome browser
AA seq
1457 aa
AA seq
DB search
MAESAQKSLVDIGKRLSQSRLNKDSLVKLLRQAAGALSELSQSRSLQRAIEPLNESLFRH
KLLQHKDKDVRLLVAVCFSEIIRVLAPDPPYDDETLKDIFKLIISMFAELSDTTSPYFTR
RVKMLETAAALKWCLPMLDICEDLVLEMFNVFFSCVREDHPQSLIQAMLSIMTQVLEEKV
SHPVLDVILRNLLKEEKGVPPASFRLAVSVIQNCTEKIEPFVRVFLTSSILEKDAIGSEL
REYYHEIIFEIFQCAPQMLLAVIPNLTQELLTDQVDVRIKAVHLVGKLFALPGHHFAHEY
RQLFVEFLKRFSDKSAEVRVSAVECSKACYMANPSGTEAIELLTALEGRLLDFDDKVRTQ
AVNAVCDLAKSNLRYIQPELILQAMERLRDKKVSVRRNAMQKLLELYRSYCSKCSEGLLT
HSDHLEQIPCRILALCYDKDCKDFRPQNMELVLAEDLFPSTLSVEEKTKHWISLFSFFTT
PHIKALNSILSQKQRLQMEMQVYLDLRRKQKENSSEELQKRSLASFVKMSASFVDPSKAE
ESFQKLHQMKDNSIFKALLQLIDERTTLQTAQTVRDTFLKRIGNKHPHYEFLRILSAKCT
YTIFSAEHVQCILLGFLSEKGAEKRNLQTIGINLLLTIVNIFPSLLRGSEEHLLRLFSEG
YSLNGKLLQMLAKAGPHISMKLRDVYPSLERICLEGTRLQSKYSVSAISALSDASNQLAF
SDLYEKLVDSLLAARNVSTVLQSLGYIAQYSGPLYESREEEITQFIIQKLFQTTDVQSSS
ELTYVDDGFECSTSCKLKVYGLKTLVRSFLPHQGTRVRHQIAELLKILLRLLPEGGISDG
FVSSESDTAHVRLAAAKSVLRLARRWDLHISPNIFHITVLKARDPSSHVRRSFLDKIHKL
LKEHAIPTKYACSFALAASDCLKEIRDDSMKYLAEFIKEYGREARIRQNCAAHDSGETMT
NYPEYVVVFLVHVLAHDLGFPSENCPDEDAYARFCSPLVVILKALVNPASVEGNKSDLSE
TVSYLVSIFRAIKKAEDAVDVCMTPKLHILSDIGMHIVKALSHTGIPLSRTPGRILLPSS
FYKVSDDSKSEEENMKFLTRCSIDGSFVERILRTFEPHSVRPTSPNSKRGRKVQEDSMRL
NLKTKANNLPLQEQTIPLTSKTTEEGENSYALGKELGKAARWQLSSKGRNKSALSPSDPH
QGSTVDDDANGAPSDDIETNPENNKLSSSCGSVAIKPSLSGSQVSSEVEVVNCIPSEKND
WKRTNRRIPTEPTTQAKSNPGIHQKAKELGDTTEVLPGHRIKLWSAIDMCFYSGTIDEFD
SQNSTHKVKYDNGEVERLCLENEHWEFIGDTPLAEKGESKFHSKDCDPATGSSISSLKKA
VDTFGHKGAQGRKALSDKGKGNPDKETVCSVADLLGAVTEKRKHPEHSVPVRTTRSASEI
IAEDAATMVRRSRRRKF
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatctgctcagaaatccctcgttgacattggaaagcgactctcgcaatcccgt
ctgaacaaggattctctggtgaaattgctaaggcaagctgcaggtgctttatcagaatta
agtcagtctcgttcactacagcgagcaatagagcctttaaatgagtctctttttcggcat
aagttgcttcagcataaagataaagatgtcagacttctcgtggcggtctgtttcagtgaa
attattcgggtcctggcacctgatccaccttacgatgatgagaccttaaaggacattttt
aaactcatcatcagtatgtttgctgaactgtctgatacgacaagtccgtatttcacaagg
agggtcaaaatgttggagactgctgctgcattgaaatggtgtctgccaatgttggacatc
tgtgaagatctagttttggaaatgttcaatgttttcttctcttgtgtgagggaagaccat
ccacagagtttgattcaggctatgttatcgataatgacacaagttctagaggagaaagtt
tctcatcctgtcttggatgtgattttacggaatcttctgaaggaggaaaagggagtgcct
ccagcatcctttaggcttgctgtttccgtcattcaaaattgcacagaaaagattgagccc
tttgttagagtttttttaacatcttccattttggaaaaggatgctatagggagtgaactt
agagagtattatcatgaaattatttttgaaatatttcagtgtgcccctcaaatgttactt
gccgtcatcccaaacttgactcaagaactactgactgatcaggttgatgttcggataaag
gcagttcatttagttggaaagctttttgcactgcctggtcaccattttgcacatgaatat
cgccaactctttgtagagtttttgaaaagattctctgacaagtcagcagaagttagagtt
agtgcagtagaatgttctaaagcttgctacatggccaacccctctggaactgaagctatt
gaacttctcactgctcttgaaggacggctgttagattttgatgataaagttagaacacaa
gcagtgaatgcagtctgtgatcttgctaaatctaacctgagatacattcagcctgaatta
atcttgcaagctatggaacgacttcgggacaagaaggtatctgtaagaaggaatgccatg
caaaagctgctagagctgtatcgatcttattgctccaagtgctctgagggtcttctcaca
catagcgatcacttggaacagattccgtgtagaattttggcactttgctatgacaaagat
tgtaaggatttcagaccccaaaacatggagcttgtgcttgcagaggatttattcccttct
accctttctgttgaggagaagaccaagcactggatttctttgttctcatttttcacaaca
cctcacataaaggcattgaattccatcttatctcagaaacagaggttacagatggagatg
caggtgtatttagatcttcgaagaaaacaaaaggagaatagctcagaagaactgcaaaag
agaagtttagcttcatttgtgaaaatgtcagcttcgtttgttgatccttccaaagcggag
gagagctttcaaaagttgcaccagatgaaagataacagcattttcaaggcattgctgcaa
ttgattgatgaacggacaactttacaaactgctcaaaccgttcgagatacgtttctcaaa
agaatagggaataagcatccgcattatgaatttttgagaatactctcagcgaagtgcaca
tataccatatttagtgcagagcatgtgcaatgtattctgttaggttttttatctgagaaa
ggtgctgaaaagagaaatttgcagaccattggcatcaatcttcttctgacaatcgtaaac
atttttccgtcattgctgagaggatcagaagaacatttactgaggttgttctcagagggt
tactcactaaatggaaaactactccagatgttagcgaaggcaggccctcatatttctatg
aaactcagagatgtctacccatcattggagaggatatgtttggagggaacacgtttgcaa
tcaaaatattctgtttctgcaatttctgcattatctgatgcttcaaatcaattggctttc
tcagatttatatgagaaactagtggattctcttcttgctgcacggaatgtctcaaccgtt
ttgcagtctctgggctatattgcacaatattctggacctttgtacgagtctcgagaggaa
gagattacacaatttatcattcaaaagctttttcaaaccacagatgttcaatcatctagt
gagctgacttacgtcgatgatggctttgaatgcagcacctcttgcaaactaaaggtttat
gggctaaaaacactcgtcagaagttttttgccacatcaaggaactcgtgttagacatcag
attgcggagctgctgaaaattttgttaaggcttcttccagaaggtggcatttcagatggt
tttgtctccagtgaaagtgacacggctcatgtcagattagctgctgcaaagtctgtcctc
cggcttgctagaagatgggatttgcatatttcacccaatatttttcatataacagttctg
aaggccagggatccttcatctcatgtgcgccgatcttttcttgataaaatacataagctt
ttgaaggaacatgctattcctacaaaatatgcttgttcttttgcattggctgcttcagat
tgcctgaaagaaatacgagatgattccatgaagtatctagctgagtttattaaggagtac
ggtcgcgaagctcgaatccgacaaaactgtgcagcacatgattcaggagaaacgatgaca
aattaccctgaatatgtcgttgtattcctagtccatgttcttgctcacgatctaggcttc
ccttctgagaactgtccagacgaagatgcttatgctaggttttgcagcccacttgttgtg
atcttaaaagcactagtcaatcctgcgtctgttgagggcaataaaagtgatctcagtgaa
actgtatcatatttagtaagcattttccgggctattaaaaaggctgaggatgctgttgat
gtttgtatgacacctaagctgcatattctttcagacattggtatgcacattgtgaaggca
cttagtcatactggcatacctttatcccgtactcctggtcggattttgctaccatcgtca
ttctataaagttagcgatgattccaaaagtgaggaggaaaatatgaagttccttaccaga
tgttccattgatggaagcttcgttgagaggatccttcggacgtttgaacctcatagtgtt
cggcctactagccctaattctaagcgaggtagaaaagttcaagaggattccatgcgcttg
aatctaaagaccaaagcaaataacttgccattacaagagcaaaccattccattaacgagc
aaaacaacggaagaaggggagaattcttatgctcttggaaaagaacttgggaaagcagca
aggtggcaactcagcagtaaagggagaaacaagtcagcattatctccttctgatcctcat
cagggttctactgtagatgatgatgcaaatggagcacctagtgatgatattgaaactaac
ccagagaacaataaactttcgtcttcttgcggttctgtagctataaaaccatcactgtca
ggttcacaggtttcatctgaggtcgaagttgtaaactgcatcccatcagagaagaatgac
tggaaaaggacaaatagaagaatccctactgaacctacaacacaagcaaaaagcaatcct
ggaatccatcaaaaggcaaaggagctcggagataccactgaggtgttacctggacatcgg
atcaaactctggtccgcaattgacatgtgtttttattcaggcaccattgatgagtttgat
tctcaaaacagcactcataaggtcaaatatgataatggtgaggttgaacgattatgcttg
gaaaatgagcattgggagtttataggtgatacacccttggctgaaaagggtgaaagcaaa
ttccattccaaggattgtgatcctgcgactggctcttctataagtagtcttaagaaagct
gtagatactttcggacataaaggagcacaggggcgaaaagctttatcagataagggaaag
gggaatcctgataaggaaacagtttgttctgttgcagatcttttaggggcagtaacagaa
aagaggaagcatcctgaacattcggttcctgtacgcacgacgagatccgcatctgaaatc
attgctgaagatgcagccactatggttcgtagatctcgaagacggaaattttga
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integrated database retrieval system
