Magnolia sinica: 131237802
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Entry
131237802 CDS
T09699
Name
(RefSeq) nuclear poly(A) polymerase 1-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
msin
Magnolia sinica
Pathway
msin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131237802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131237802
Enzymes [BR:
msin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
131237802
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
131237802
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
131237802
NCBI-ProteinID:
XP_058091780
LinkDB
All DBs
Position
2:complement(136088798..136107251)
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AA seq
803 aa
AA seq
DB search
MGSPGLINRSNGQHHLGVTEPISLGGPSEFDLIKTQELEKFLADAGLYESQEEAVAREEV
LGRLDQIVKTWVKKAGRAKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA
TREEDFFIELHQMLAEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYAKLSLWVIPEDLD
ISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGF
LGGINWALLVARICQLYPNALPSMLVSRFFRVFTQWRWPNPVMLCPIEEGSLGLPIWDPR
RNFRDRLHQMPIITPAYPCMNSSYNVSSSTLRVMTEEFQRGNEICEAMEINKADWNTLFE
PYPFFDAYKNYLEIDITAENDDDLRKWKGWVESRLRQLTLKIEKYTFNMLQCHPHPGDFS
DKSRPFHCCFFMGLQRKQGVPVNEGEQFDIRLTVEEFKQSVGAYTLWKPGMEIQVSHIKR
RNIPNFVFPSGVRPSRPTKVSHLNGRLALKPKVSNAVQAYKSCVAAGSVKEADVADEARK
REPVGINVDSSFTSEKSILAIASGSVGADGSERYGPPIGSPGATSSCSKEAEGSIKNIDG
SDETRKRKWVDDNPESNPTNEKCYAAAACGEGDRSCNPLPIRSSGIAISCSKEAEEIAIE
KLTSTQTIDHTAFPEELDELEEYGSAYQVRDFGGDSNGGSTASSTANAVEGKVVGLQASH
FQNGAGLEELEPPELPVPLPNGPPASVSQRKPLIRKNLQDVKILNLSNGWPNMVCHSDRY
VKVMVATVMPYGVVTAVIEKNDP
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgggtagccctgggttgattaatcgcagtaacgggcagcaccaccttggtgtcacggag
ccaatttcattaggtgggccgtcggagtttgacttgatcaagacccaagagctcgaaaag
tttcttgcggacgcgggattgtatgaaagtcaggaggaagccgttgctagggaagaagtg
cttgggagattagaccagattgtgaagacttgggtgaagaaggctggccgggcgaaggga
ttcaatgagcagcttgtccaagaagcaaatgctaagatattcacatttggttcttatcgg
ttgggggtacatggccctggtgcagatattgacacgctgtgtgtggggcctagacatgcc
acaagagaggaagattttttcattgaacttcatcagatgttggctgagatgcctgaagta
acagagttgcacccggtgcccgatgctcatgtgcccgtgatgaagttcaaattcagtggg
gtgtccatagatcttttgtatgcaaagctctcactttgggtaattcctgaagatttggat
atttcacaagactcgatacttcagaatgccgatgaacaaactgtccgtagtctcaatggt
tgcagagttacagatcaaattttgcggttggtcccaaatattcagaatttccgcacaacc
ttgagatgcatgaggttttgggcaaaacggcgtggcgtttattcaaatgtttcaggcttt
cttggtggtataaactgggcattgcttgttgctcgtatatgtcagctatacccaaatgca
ttgcctagtatgttggtatctcgtttttttcgggttttcacccaatggcgctggccaaat
ccggtgatgctatgtcctattgaagagggctccttgggacttcctatttgggatccaaga
agaaattttcgtgacagactccatcaaatgcctataatcacgcctgcgtatccttgtatg
aactctagctacaacgtctcatcaagcactttgcgtgtaatgactgaagagttccagcgt
ggaaatgaaatatgtgaggcaatggagataaacaaggctgattggaatacccttttcgag
ccctatcctttcttcgatgcatacaagaactatctggagattgacatcactgcagaaaac
gatgatgacctgaggaaatggaaaggctgggttgaatctcggctccgccaactgacattg
aagatagagaagtacacattcaacatgcttcagtgtcacccgcacccaggtgacttctca
gataaatcgaggccattccactgctgttttttcatgggtctgcaacgaaagcaaggtgta
cctgtaaatgaaggggaacaattcgatataaggttaacggttgaagagtttaaacagtcc
gttggtgcttacacactgtggaaacctgggatggagatccaggtgtcccatataaaacgt
aggaacattcccaattttgttttccctagtggggtccggccatctcgccccactaaggtt
tcacacttgaatggcagattggctttaaaaccaaaggtctctaacgcggttcaagcatat
aaatcatgtgtagcagcgggcagcgttaaagaggcagatgtagcagatgaagcaagaaag
agagagcccgttgggattaacgtggatagtagcttcacgagtgagaagagtattctcgca
attgcttctggcagtgttggagctgatggatctgaaagatatggcccacctattggctct
cctggtgcaaccagttcatgctctaaagaagcagagggcagcattaagaatattgacggg
tcagatgaaacaaggaagagaaaatgggttgacgataatccagaaagcaacccgacgaat
gaaaagtgttatgctgcagctgcttgtggtgagggggatcgaagctgtaaccctcttccc
attagatcctctggcattgcaatttcatgctctaaagaagcggaagagattgctattgag
aagctaacttctactcagacaatcgaccacaccgctttccctgaggaacttgatgagctt
gaggaatatggatcagcttatcaggttagagattttggtggggactcaaatgggggctcc
actgcatcctcgacagcgaatgcagttgaagggaaggtcgtaggcttgcaggccagtcat
ttccaaaatggggcaggattagaggaactcgagcctcctgagctgcctgttccattacct
aatggcccacctgcttctgtctctcagcggaagccacttatcaggaaaaatctccaagat
gttaaaatcctaaacctttcaaatgggtggccaaacatggtgtgccatagcgaccgttac
gtaaaggtaatggtggcaaccgttatgccttatggggttgtaacggccgtaatagaaaaa
aacgacccgtaa
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