Magnolia sinica: 131237952
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Entry
131237952 CDS
T09699
Name
(RefSeq) uncharacterized protein LOC131237952 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
msin
Magnolia sinica
Pathway
msin03030
DNA replication
msin03410
Base excision repair
msin03420
Nucleotide excision repair
msin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
131237952
03410 Base excision repair
131237952
03420 Nucleotide excision repair
131237952
03430 Mismatch repair
131237952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msin03032
]
131237952
03036 Chromosome and associated proteins [BR:
msin03036
]
131237952
03400 DNA repair and recombination proteins [BR:
msin03400
]
131237952
DNA replication proteins [BR:
msin03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
131237952
DNA Replication Termination Factors
ELG1-RFC complex
131237952
Chromosome and associated proteins [BR:
msin03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
131237952
DNA repair and recombination proteins [BR:
msin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
131237952
Check point factors
HRAD17(Rad24)-RFC complex
131237952
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA_lid_RFC1
Resolvase
Rad17
Motif
Other DBs
NCBI-GeneID:
131237952
NCBI-ProteinID:
XP_058092046
LinkDB
All DBs
Position
2:complement(139585910..139594585)
Genome browser
AA seq
786 aa
AA seq
DB search
MPMMRNASRYNRAQAHSSLKQRRSGYEPSDAESEWRESPWDDLKKDSNQRGRVLVAEPLK
TALRSARSISPLGHDQRYAAKPDHDFSFPIKASEVSPIPRSKSISPYRPHVDDGGSILPK
LGSHLGANGTHFAVSENQRHISSFEVGKEEPYVENDELKGSYWKPNQKSPHKFMDSGKAS
RMSERSNYSHRSMSTPKLRAREKVQHTSIVSKEQRWDRSPSPLAGIPVQKQKKSSHTKAP
SASEINEMIANEKLSKSAVPDALMMESTDSIPQGDIFFSRDFTALHKDAVPKNIGSGSSF
APKAKAVSERISNVQQTSRGISGFDQNMQVSAVSTVPSQRNMFSSSAMSRQSCSKTSDGS
SKMADGSRVMSESFRKFTASIQRSQKDMWFSCVRGGACGNSKSPETRNIDEASFIERAFV
VENLRQFWADKHRPDSLSGFICNKSQAQHLKQLISLHNCPHLLFRGPSGSGKKALGMALL
WEIFGASAWQISNDLRYFHVQETQQMPVVVPLTSSPHHVELNLKSISKNARYALMALVKE
ITSNRAPIPEFSDASLKADYKVIVLYEVDKLADNVQHLIKWIMDCHTDACKIILCCEDDT
GLLESIKSRCKLITVDAPVTHEIMEVLIQIARKENFDLPMSFAAKIATKSKQNLRNAIMA
LEACKAHNYPFTDEQPIPLGWEELLVELAAEILADPSPKRLPFVRGKFQRLLVDIVHPKL
ILQKLVEQFLRGVEASLKRELYYWHAYYDKRLPSGTGALLKLEEFVAKFMSIYGKGFSGS
GRLQCK
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgcccatgatgcggaatgcctcgagatacaacagagctcaggctcattcctctctcaaa
cagaggcgaagtggctatgaaccttccgatgcggaatctgaatggcgggagagtccatgg
gatgatctaaagaaagatagtaatcaaaggggccgggttttagtcgcagaaccgctgaaa
actgcattacgttctgcgagaagtatcagtcccttgggccatgatcaaaggtacgctgca
aagcctgatcatgatttctctttccctattaaagcttcagaagtcagcccaatcccaagg
agtaaaagtatatctccatacagaccacacgtagatgatggtggtagtattttgcctaaa
ttaggctctcatttaggtgcaaatggcactcattttgcagtttctgagaatcagaggcat
atttcttcatttgaagtggggaaagaggaaccctatgtggaaaacgacgagcttaaaggc
tcatactggaaaccaaaccaaaaatctccacacaagtttatggactcagggaaagcttct
agaatgagcgagaggtctaactacagccacaggtccatgtcgactccaaaattgagagca
agggagaaagtgcagcacactagtattgtttccaaggagcaaagatgggacagaagcccc
tcaccattagcaggaatcccggttcagaaacagaagaaaagttctcacacaaaagcacct
tctgctagtgaaatcaatgaaatgattgctaacgaaaagctttcaaaaagtgcagttcct
gatgctttaatgatggaaagcacagactcgattcctcaaggcgatatcttcttttctcgt
gacttcacagccttgcataaagatgcagttccgaagaacattggttctggaagcagcttt
gcacccaaagctaaggcagtttctgaaagaatttccaacgttcaacagacaagcagagga
atcagtggtttcgatcagaatatgcaagtgtctgcagtcagtactgttccatcgcaaaga
aatatgttctcgagctctgctatgagtaggcagagttgtagtaaaactagcgatggaagt
agtaagatggctgatggtagcagagtgatgagtgagagtttccggaaattcactgccagc
atacaaagaagccaaaaggacatgtggttctcttgtgtaaggggcggtgcttgcgggaac
tcgaagtctcctgaaactaggaacatagatgaggcttcatttattgagagggcattcgtg
gtggaaaaccttagacagttctgggctgacaagcatcgacctgattcattgagtggattc
atttgcaacaaatcacaagcccaacatctcaagcaattgatatccctccacaactgccct
catcttctgttcaggggaccttcgggctcaggaaagaaagccctaggcatggctttactg
tgggaaattttcggtgcttcagcttggcaaatctcaaatgatttaagatacttccatgtt
caggaaactcagcaaatgccagtggttgttccactaacttcaagccctcaccatgtggag
cttaatctgaagtctatatcaaagaatgccagatatgcattaatggctctagtcaaggaa
ataaccagcaaccgtgcacctattcctgaattcagtgatgcaagcttaaaggcagattac
aaagtaatcgttctctatgaggttgataaactcgcagacaatgtgcaacacttgataaag
tggataatggactgtcatacagatgcatgtaagatcatactctgttgtgaagatgacact
ggccttctcgaatccatcaaaagccgctgcaagcttattacagtggatgcccctgttact
catgagatcatggaggttcttattcaaatagcaaggaaggagaactttgatctgccaatg
agttttgcagctaaaattgcaaccaaatcgaagcagaacttgaggaacgcaatcatggca
cttgaagcatgcaaagcacacaactatcctttcaccgatgaacaaccaatcccactaggc
tgggaagagctcctggtggaacttgcagcagagattctagccgatccatcacccaaaaga
ctgccttttgtacgagggaagtttcagagactgctggtggatattgtccaccccaaacta
atccttcagaagcttgtggaacagtttcttaggggagtagaagctagtctaaaaagagag
ctttattactggcatgcttactacgataagagactgccctctggaacaggcgccctcctg
aaattagaagagtttgttgcgaagttcatgagcatatatgggaagggcttcagtggcagt
ggtcggttgcagtgcaaataa
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