KEGG   Magnolia sinica: 131239133
Entry
131239133         CDS       T09699                                 
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
msin  Magnolia sinica
Pathway
msin03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:msin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    131239133
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msin03400]
    131239133
DNA repair and recombination proteins [BR:msin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     131239133
SSDB
Motif
Pfam: Tyr-DNA_phospho FHA FHA_2 DUF5737
Other DBs
NCBI-GeneID: 131239133
NCBI-ProteinID: XP_058092675
LinkDB
Position
1:9629528..9656039
AA seq 682 aa
MAESRVKVGFLAPIKNNKKEADNASGVPIFEGVNVIGRNDLSVSDKRVSRKHISLTARPD
GSAEVVVEGPNPIIVKSGDQRKKICSQDKVMIVHGDILELIPGNFYFKFIALAIENHTSS
SKTNASFSTEGKKLSEVETVTLKRKRQVLEDEAFARTLQDELGNGSNSLVTVKQVDTLSR
SGTIVGSHDNLEAIRRFRVDKNELPLTFRLMRVQGLPAWANSSSVSIGDVIQGNVLVAVL
SNYMVDMDWLISACPILRKIPHGLVIHGESGARVEHMKKSMPANWVLHRPPLPISYGTHH
SKAMLLVYLRGVRIVVHTANLIYVDWNNKSQGLWMQDFPWKDQKNLSRPCAFENDLVDYL
NALKLPDVSVNLPGLGNVNVNASFFKKFDYSNASVRLIASVPGYHAGSNLKKWGHMKLRT
ILQECVFDKEFRGSPLVYQFSSLGSLDEKWMAELASSMSSGLSDDKTPLGLGKAMIIWPT
VEDVRCSLEGYAAGNAIPSPQKNIEKDFLKKYWARWKADHTGRGRAMPHIKTFTRYNGQN
LAWFLLTSANLSKAAWGALQKNNSQLMIRSYELGVLFLPSLIKGEGYGFSCTENGGSNQG
NKCESSRNAEGCKTKPVTLCGQGKRSPDSSSAVIQLPVPYELPPQPYKHEDIPWSWDRRY
QKKDVYGQVWPLHVQLYTDQDS
NT seq 2049 nt   +upstreamnt  +downstreamnt
atggccgaatcccgggtgaaggttggattcttggctcccattaagaacaataagaaggaa
gctgacaatgcctcaggtgtaccaatttttgaaggagtgaatgttattggtcgtaatgat
ctgtccgtgtctgacaaaagagtgagccgcaagcatataagtttgactgctaggcctgat
ggttccgccgaagtggttgtggagggaccaaatccaatcattgttaaatctggggatcag
agaaagaaaatatgctctcaagacaaagtcatgattgttcatggtgatattctagagttg
attcctgggaacttttatttcaagtttatagcgctggctattgagaatcacacatcttca
tccaaaacaaatgcaagcttttcaactgaaggaaagaaacttagcgaagtggagaccgta
acattaaaaaggaagcggcaggttcttgaagatgaagcatttgcccgaactttgcaggat
gagctgggaaacggtagcaactctttagtaactgtaaaacaggttgacactttgtcccga
tcgggcaccattgttggttctcacgataacttggaggccattcgtaggtttagggttgat
aaaaatgaactaccgttaacctttcgacttatgcgtgttcaagggctacctgcatgggca
aattcctcctcagtttccataggggatgtgatacaggggaatgtgcttgttgctgtcctt
tcaaattacatggtggacatggattggttaatatctgcatgtccaattctgaggaagata
ccccacggacttgttattcatggagaaagtggtgctagagtggagcatatgaagaagagc
atgcctgcaaattgggttctgcaccgccccccgcttcccatttcatatggaacacatcat
tcaaaggccatgctccttgtatatcttcggggggtgcgtattgttgtacatacagcgaat
ttgatctatgttgactggaacaacaaaagccaaggtttgtggatgcaagatttcccgtgg
aaagatcagaagaatctgagcagaccatgtgcatttgaaaatgacttagttgattacctc
aatgcactaaagttgcctgatgtcagtgttaatctgccaggccttggcaatgtcaatgtt
aatgcttcattctttaagaagttcgattatagcaatgcatcggtcagattaattgcatct
gttcctggttatcatgcgggttccaaccttaaaaagtggggccatatgaaactacggacc
atcctgcaggaatgtgttttcgacaaagaatttcgagggtcccctcttgtgtatcagttt
tcctcacttggttctttggatgagaagtggatggctgaattagcatcttcaatgtcatcg
ggtttatctgacgataaaacacctttgggcttggggaaagcaatgataatttggcctact
gttgaagatgtcagatgctctttggagggttatgctgctggtaatgccattccaagccca
caaaagaacatagagaaagatttcttgaagaagtattgggcaagatggaaagcagatcac
actggtcggggtcgtgcaatgcctcatataaaaacgttcactcgatacaatggtcaaaat
cttgcttggtttctcctgacttcagcaaaccttagcaaagctgcgtggggtgcacttcag
aagaataactcccaacttatgatccgttcttatgagttgggggtcctattcttgccatct
ctcatcaaaggtgaaggttatggtttttcttgtacagagaatggcggttccaaccagggt
aataaatgcgaatcatcacgaaatgcggaagggtgcaaaacaaagccggtgactctttgt
gggcaaggaaagagaagtccagattcatcatctgctgtcatccaactgccagttccatat
gaactccctccacaaccatataagcatgaagatataccatggtcatgggaccggagatat
cagaagaaggatgtctatggtcaagtttggccactgcatgttcagctctataccgatcaa
gactcttga

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