Magnolia sinica: 131239198
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Entry
131239198 CDS
T09699
Name
(RefSeq) endoribonuclease Dicer homolog 2-like isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msin03036
]
131239198
Chromosome and associated proteins [BR:
msin03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
131239198
microRNA pathway
RISC loading complex
131239198
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GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
TubZ_C
Motif
Other DBs
NCBI-GeneID:
131239198
NCBI-ProteinID:
XP_058092761
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Position
3:complement(620006..629836)
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AA seq
777 aa
AA seq
DB search
MEKEQAFHQRALDGTEVEATDKFPVEDDDAKESGGINPFPYNAGQVDYFPGELVGHWVSF
SALGLYHCYSLGLAGNVELDVPFRGISLIVKCKLEADFTATQFQLETVRGSVTVDMKYVG
PVHLTTDQVNMARRFQITILRLLINHNWSTLQHDLNGPHREEETLATTTYLVLPSIIDHD
LVLPSIDPDQNSSIIDWDCVKAASFSSNVDGMVGEDGIPHCCSLKGDDIRRMHTKDGPVC
SCMLRNSLVITPHNGNLYCITGILDNLNGNSPMKSKKGKSLLCGRRLFKVQNWLRRSTFQ
KGKERSHIDSVAPKLCEIIMSPISASTLYSFSFIPSIMHRMKSMLLAITLKEMQMNHCTQ
KFDVPDIKVLEAITTDKCEEEFSLESLETLGDSFLKYVVSQQLFRDNKQDREGTLSLKRE
SMISNANLCKLGCNRKLPGFIRNERFDPKQWVIPGDPCGCYWKDEMFVSPLKKIYYEGTR
PMNSKVISDVVEALIGAYLSTSGELAALYFMKWLGLLVDFVKEISDEKPFLEAEKYVNVS
CLQSLLNYSFRDPSLLVEALTHGSYQVADIPRCYQRLEFLGDSVLDYLITLYFYKEYPGI
SPGVLTDLRSASVNNECYALTTVKFGLYKHILHQSPGLDEGIMSFVNNIGQSLPDSTFGW
KAESPPPKVLPDILESIAGAILVDSGFDTNAVWQTIRPLLEPMATPDTLEHQPMRELEEF
RVRKSYEKPTFQDGVASIKADGIIHEETYVSSNKKTLEKKGAKALLGSLKATNLGSE
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggaacaagctttccatcagcgtgcacttgatggaactgaagtagaagctact
gataagtttcctgtggaagatgatgatgccaaagaaagtggagggattaatccatttcca
tataatgctggacaagttgattatttcccaggagagttggttggccattgggtttccttc
tctgcactgggcttgtatcattgctactcattgggcttagctgggaatgttgaattggat
gtcccctttcgaggcatttcacttattgtaaagtgcaagttggaagctgattttaccgct
acacaatttcagttggaaaccgttaggggttctgtgactgtcgacatgaaatatgtgggt
cccgttcatcttacaactgaccaggttaatatggctagaaggtttcagatcactattctc
agattgcttatcaaccataactggagtacactacaacatgatttaaatggacctcatcgg
gaggaggagactcttgcaactacaacttacttagtgctcccatctattattgatcatgat
ttagtgctcccatctattgatcctgatcagaattcttcaattattgattgggattgtgtt
aaagcagcctcattttcttctaatgtggatggtatggttggggaagatggaattccgcat
tgttgttctctaaaaggtgacgacattcgacggatgcacacaaaagatggtcctgtatgc
agttgtatgcttaggaattctttggtgatcactcctcataatgggaatctctattgcatt
actggtatcttagataatcttaacgggaactctcctatgaagtccaaaaagggaaaatca
ttactttgtgggagacgcctgtttaaggtgcaaaactggcttcggaggtctacgtttcaa
aagggaaaagaacgaagccacatagatagtgttgcacctaaactctgtgagatcattatg
tctcccatctccgcaagtacattgtactctttctcattcattccgtctattatgcatcgt
atgaagtccatgcttctcgccatcacattaaaggaaatgcaaatgaatcactgcacgcaa
aaatttgatgttccagacatcaaggttttggaagcaattaccacagacaaatgcgaagag
gaattttctttggaatcactagagacacttggagactcttttctcaaatatgtagtaagt
caacagttattcagagataataagcaggaccgcgagggcactcttagtcttaagagggaa
agcatgatatccaatgctaacctttgcaagctagggtgtaatcgaaaacttccgggtttc
atacgtaatgagcgattcgaccctaagcagtgggttattcctggtgatccttgtggatgt
tattggaaggatgaaatgtttgtatcacctttgaaaaagatctattatgagggaaccagg
cctatgaatagcaaagtaatttccgatgttgttgaggcacttattggagcataccttagc
acaagtggggaattagcggcattgtacttcatgaagtggcttggtttgttggttgatttt
gtgaaagagatctcagatgaaaagccatttctagaagctgagaagtacgtaaatgttagc
tgtcttcaatcactgcttaactattcattccgtgacccttctctattggttgaagcattg
actcatggttcatatcaggttgcagatattccaagatgctatcagcgcctcgagttcctt
ggagattcggttttggactatctcatcaccctctacttttacaaggaatatcctgggatt
tcccctggagttctaactgaccttaggtctgcttctgtaaacaacgaatgctatgccctc
acaacagtcaagtttggactctacaagcacattcttcatcaatcacctggcctagatgaa
ggaattatgtccttcgtaaataacattgggcaatcacttccggactcaacattcggatgg
aaagcagagtcacctcccccaaaggtactcccagacatactcgaatcaattgctggggct
attcttgttgattctggatttgatacgaatgctgtttggcagaccataaggcctcttttg
gaacctatggctaccccagacacactagaacaccagccaatgcgggaacttgaagaattc
cgtgtgagaaaatcatatgagaagccaacattccaagatggggtcgcttctatcaaggca
gatggaatcatccacgaagaaacatatgtcagtagtaataagaagacattggagaaaaaa
ggtgcaaaagcccttttggggtctttgaaggcaactaatcttgggtcagaatga
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