Magnolia sinica: 131239341
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Entry
131239341 CDS
T09699
Name
(RefSeq) novel plant SNARE 11-like
KO
K08494
novel plant SNARE
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msin04131
]
131239341
Membrane trafficking [BR:
msin04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
131239341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
Helo_like_N
MCPsignal
GCIP_C
Neur_chan_memb
Occludin_ELL
MutS_III
PLU-1
CHAD
DUF948
TMPIT
PCRF
BLOC1_2
Prominin
DUF5089
Vps53_N
Motif
Other DBs
NCBI-GeneID:
131239341
NCBI-ProteinID:
XP_058092986
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All DBs
Position
3:4471714..4498074
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AA seq
263 aa
AA seq
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MDSLSAISEELANIDGEINDIFRALSNGFQKLEKIKDSNRQSRQLEELTGKMRDCKRLIK
DFDREVKEEESRNTPDTNKMLSEKKQSMIKELNSYVALKKQYASSLDNKRADLFDGPGGG
GGFGEENVLLASSMTNQQLIDGGNRMMDETDQAIERSKKVVEETINVGAETAAALKAQTE
QMSRIVNELDSIHFSIKKASKLVKELGRQVATDRCIMTMLFLIVIGVIAIIIVKLVNPNN
KDIRDIPGLAPPALTRKLLWDTN
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggattcgttgtctgcgatcagtgaggagctggccaacattgatggagagatcaatgac
atctttcgagcgttatcaaatggattccagaaactggagaagattaaagactcaaatagg
cagagccggcagttggaagaacttacagggaagatgcgggattgcaagaggcttatcaaa
gattttgaccgagaagttaaggaagaggaaagtagaaatactccagacaccaacaaaatg
ctcagtgagaaaaaacaatcaatgattaaagaattgaattcttatgtcgctctcaaaaag
cagtatgcaagcagtcttgacaacaagcgagctgatctctttgatgggcctggtggtgga
gggggttttggtgaagagaatgttctgctagcttcgtctatgacaaatcagcagttaatt
gatggtggaaatagaatgatggatgagacagatcaagcaattgagcggtcgaaaaaggtt
gttgaggaaaccatcaatgttggggctgagacggcagctgctctaaaagcacagactgaa
caaatgagtaggatcgttaatgagctggactcgatccatttctcaataaaaaaggcctcc
aaactggttaaggaacttggtaggcaggttgcaactgaccgatgtattatgaccatgctc
ttcttaattgtcatcggagtgatagcaatcatcattgtaaagcttgtaaacccaaataac
aaggatatacgggatattcctggattagccccaccggcgcttacccggaagcttctgtgg
gatacaaactag
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