Magnolia sinica: 131239412
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Entry
131239412 CDS
T09699
Name
(RefSeq) uncharacterized protein LOC131239412 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131239412
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
131239412
Surveillance factors
Other surveillance factors
131239412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
131239412
NCBI-ProteinID:
XP_058093087
LinkDB
All DBs
Position
3:7127434..7146738
Genome browser
AA seq
1697 aa
AA seq
DB search
MAEGKLDLPDDLLSSKSPGDPWAPKESSDDAARVNDDEKALMGFFDDSKDQVTSESNIPL
SPQWLYAKPSDIKTGLSASSGDMRAPNSLPHGIAVDTVQKEGWRLDGSQEKKEWRRNAPE
AETNRRWREEERETGLLGRRDRRKESDRRADSASIREITESRPLPSSDRWHDVSSRNSGH
ETRRDSKWSSRWGPEDKEKDSRADKKVDGEKEDAHNEKQSFISSTRAASERENDSRDKWR
PRHRQEVHSGGSAVYRAAPGFGLERGRVEGSNLGFAPGRGRPNTVGSPSLSRPSSSGPIG
AAPADKNDPGHGKAGLSADTFCYPRGKLLDIYRRHKLLPAFDITPDGIEEAPPITQIGLI
EPLAFVAPDAEEEAVLEDMWKGKVTSSGVSHNLTIDSVGKVHDDETGVADGISTESKQCI
FPASSTEEAANDSNLAECDNKLTATVDVMTSGGFTSEVRKGDDICNIRELDSSLMIISEN
KAGQTSIVNGDGQAESSTSFKPLKFKDVESATSFDIRTKLPDDSNLLFDPLSSPEISGNE
QYVKSNGEAKVLEQVAPPEEMSLFYRDPQGEIQGPFLGVDIISWFEQGFYGTDLPVCLSD
APEGTPFQELGEVMPHLKLKVHSVSGFNTVNKPYPSDSVEGTSDTSALAPDFTTSTAVTD
QQWASSEFEAPSRQPVQPRISKREDPLEPHYAILPPIDSETSRGIVNAERRNFHEFVEHD
TEEVLFSGRHGSNSGNPVAKLAGNLHDPLGNPTSHHLQANELGENSMLNHNVLKDNNNNF
HPFGLLWSELEGPHPKLSHSSNMSSGVGEQGPLINTAMERDAALFNRKQNSVSALADSPI
VRETWPDSFRRNALAGSNILQDVVDARHLSHMEQESNRFDLAEHMLSQQLLQKQRLQQQD
LLSTHPSMHLNGSVLEQLAGSALPQSLNPAHQQSMSQPMVDFEHLLKLQFQQQRQLQLQQ
QHDLQQQQRQQLHHHHQMQLQQQQQQQQSHVQQLLLEQFLHQQMHDPGFAHSRVDPLRSN
NMLDQGLFRQHLLHELQQHSHPPLRPHDPSIEQFIQSKFGHSLHPEQHNELLELLSHAKH
GQMHPLDQQLLLGIQQEQLRAQQFSTSSRLQPSLEEERHVGGVWSVDESGQFVRTAANSH
QTQSAGFSPLDFYQQKQRPSSYEQPSSLERNLALHERLHRGIYEPSSLPFERPIPLHGAA
PGRNLDVFNTLARVQELDIQEHHSQMHSPGQMSSFSSDIRSLHPQIPNQFHASHLDSMDG
GLTERNGQPPNEWIESRMRQLHLEAERRKRESEMNLISEDVSSWASAMGNGENSKRVMMD
LLHQKLVHPSNQSLELNESNTTSSYERREPSRLVSASASDHPYNLLMGQTYLTDSFAEGP
QGHNLVNAGPEQLVNAVMEEQAHTVESSERLPYRSNSGAFIEDEQFFPGINETARTIYAD
PSMVSKPSVERVDLSEAKEGKKGKKRGSKSKVVNKPVTEAQESIVELAGGAVTDRGKLLV
NAPIRNASLVSPGGSVGFYNYDTGVDSAYGEESAKDRVSSILSKGLDSTLLKSPHVSRVL
SSQEALSELASTPSVKGKNQINLASSDEGRRDHSVNPATQASETTASIKKEMRFRRTSSC
SDTDTSEPSFIDMLKSTKKLAPETDATAGATESLDAAQGGKSGKKKGKKGRQIDPALLGF
KVTSNRIMMGEIQRPED
NT seq
5094 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggcaagctcgatctgccagacgatctgctttcctcgaaatcacctggcgat
ccgtgggccccaaaggaatcctcagatgatgctgctcgagtaaacgatgatgaaaaggcg
cttatgggtttctttgatgactccaaagatcaagtaacatcagagagcaatataccactg
tctcctcaatggctgtatgctaagcctagtgatattaagaccggtctttctgcttcatca
ggggatatgcgtgcaccaaattccttgcctcatggaatcgctgtggatactgttcagaaa
gaggggtggcgcttggatggatctcaggaaaagaaagaatggcgaaggaatgcacctgag
gctgaaactaatcgccgttggcgtgaggaggagagagaaactggcttacttggtaggaga
gaccgcagaaaagagagtgatcgccgtgctgacagtgcttcaattagagaaatcactgaa
agtaggcccttgccttcatctgataggtggcatgacgtcagtagtcgtaattctgggcat
gaaacccggcgagacagcaaatggtcatcaaggtggggtccagaggacaaagagaaggat
tctcgagctgataaaaaggtggacggagagaaggaagatgctcataacgaaaagcaatcc
tttataagcagcactcgtgcagcttctgaacgtgaaaatgattctcgtgacaaatggagg
ccacgccatcgtcaagaagttcattcaggtgggtcggcggtttaccgtgctgcgccagga
tttgggcttgagagaggaagggtggagggttcgaatctagggtttgctccaggacgaggg
aggccaaacactgttgggagcccgtcactcagcaggccttcctcgtcaggacctataggt
gctgcaccagcagataagaatgaccctggacatgggaaggctggtttgtctgcagataca
ttttgctacccgaggggaaagcttcttgacatttataggagacacaagcttcttcccgct
tttgatatcacccctgatgggattgaggaagctcctccaataactcaaataggcttgata
gagccattggcctttgttgctcctgatgcagaggaggaggctgtcctagaagatatgtgg
aaggggaaagtcaccagcagtggagtgtctcacaatctgacaatagacagtgtggggaag
gtccatgatgatgagacaggtgttgcagacgggatttcgactgagagcaaacaatgcata
ttcccagctagtagcactgaagaggctgcaaatgattccaatctggcagaatgtgacaat
aaacttactgctacagttgatgtaatgacttccggaggctttacttcagaagttcgaaag
ggtgatgacatctgcaatatcagagagctggacagtagcctgatgatcatttctgaaaac
aaagctggtcaaactagcattgtgaacggtgatgggcaagctgaaagttctacttctttc
aagcccctcaagttcaaagatgttgagtcagccacttcttttgatattcgtaccaagcta
cctgatgattcaaatttactatttgatcctctatcttccccagagatttctggtaatgag
cagtatgtgaagagtaatggtgaagcaaaggtgttggaacaggttgccccgcctgaggag
atgagtttgttttaccgggacccacaaggagagatacaaggaccttttttaggtgtcgac
attatttcatggtttgaacaaggtttttatggtaccgacttgcccgtgtgtctatcagat
gctcctgagggaaccccttttcaggaactcggggaagtcatgccacatttgaaacttaaa
gttcattcagtctctggttttaacactgttaataaaccatacccatctgattccgttgaa
ggcacctcggacactagtgcacttgcacctgattttaccacatctactgctgtaactgac
caacaatgggcatcttctgaatttgaggctccatcacgccagcctgttcagccaagaata
tccaaacgggaggatccattggaaccacattatgctattttgccacccatagattctgaa
acttcaagaggcattgtcaatgctgagaggcggaactttcatgagtttgttgaacatgat
actgaagaagtgctgttttctgggcgccatgggagtaacagtggaaatcctgtagcaaaa
ctggctggtaaccttcacgatccattagggaaccctaccagccaccatcttcaagcaaat
gaattgggagaaaatagcatgcttaatcataatgtcttaaaggataataataataatttc
catccctttggcctgttgtggtcagagctggaagggcctcatccgaagctgtcacattcg
tcaaatatgtcatctggtgttggcgaacaagggcccctcattaatacagccatggaaaga
gatgctgctcttttcaatcgtaagcagaattctgtaagtgcattagctgactcccctatt
gtcagggagacatggcccgatagttttagaagaaatgcacttgctggctcaaatattctt
caggatgtggtggatgcccgccacttgtcacacatggagcaagaatccaaccggttcgat
ttagcggagcacatgctgtctcaacagttgctgcaaaaacaacgccttcaacagcaagat
ctactctctactcatccgtcaatgcacttgaatgggtccgttctagagcagttggcaggc
tctgccttaccacagagcttgaatcctgctcaccagcagtcgatgagtcaacccatggta
gatttcgaacatcttttgaagcttcaatttcaacagcagcggcaacttcagctccaacaa
caacatgatttgcagcagcaacaacggcaacagcttcatcatcatcaccaaatgcaatta
cagcagcagcagcagcagcagcagtctcatgttcaacagcttcttcttgaacagtttttg
catcaacagatgcatgatcctggctttgcccattcacgtgttgatcccctcaggagcaac
aacatgcttgatcaaggcctatttaggcagcaccttctacatgaactgcaacaacattct
catcctcctctacgaccccatgatccctccatagagcagttcattcaatcgaaattcggc
cacagcttacatcctgagcagcacaacgaacttttggagctactatcacatgcaaagcat
ggacagatgcatcctctggatcagcagcttcttttgggtattcagcaagagcaactgcgt
gcgcagcagttctccacatcatcgaggttgcaaccatccttggaagaagagaggcatgtt
ggtggagtctggtctgttgatgaatctggtcagttcgtcaggacagctgctaattctcac
caaactcagtctgcaggatttagccccttagacttttaccagcagaagcagaggccgtct
tcatatgaacaaccaagcagtctcgagcggaaccttgccttacatgaacgcttgcatcga
ggcatttacgaaccaagctcactgccctttgagaggccaatccctttgcatggtgctgct
cctgggaggaacttggacgtttttaacactcttgcacgggttcaagagctggatatacag
gaacaccattctcaaatgcactcgcctggtcagatgagttctttctcgtctgacatccgc
tcacttcaccctcaaatccctaaccagtttcatgcatctcatctagattcaatggatggt
ggcttgactgagcgcaatgggcagccaccaaatgaatggattgaatcacggatgcgtcag
ttgcatcttgaagctgagcgaagaaagagggagtcagaaatgaatctcatctcagaagat
gtaagttcatgggcatcagcaatgggaaatggtgaaaactcaaagcgagtgatgatggac
ttgcttcatcaaaaacttgtccatccttctaaccagtcattagaattgaacgaaagtaat
actacttcatcctatgaaaggagggaaccttctcggcttgtttctgcatctgcttcagat
catccttacaatcttctcatgggtcagacatacttgaccgattcatttgcggaagggcct
caaggtcataatttagtgaatgcggggccagaacaattggttaatgcagtcatggaggag
caagctcacaccgtggagagtagtgaaaggttaccttacagatcaaattctggagcattc
attgaagatgagcagttcttcccaggtatcaatgagacagcccggaccatctatgcagat
cctagcatggtcagtaagccatcagttgaaagagtggacttatcagaggcaaaagaggga
aagaaggggaagaagaggggctctaaaagcaaggtagtgaataagccagttacagaagct
caagaaagtattgttgagctggcaggaggtgctgttacagaccgagggaagcttctcgtt
aatgcccctattaggaatgcttcacttgttagtcctggaggaagtgttggcttctacaac
tatgacacgggagtggatagtgcctatggtgaagaatcggcgaaggatagggtatcctct
atcctttccaaaggtcttgacagcactttgctgaaatccccacatgtctcgcgggtttta
tcatcccaggaggctttatctgagttggcctccactccatctgtcaaagggaagaatcag
atcaaccttgcatcttccgatgagggaagacgggatcacagtgtaaatccagcgactcag
gcatctgaaaccacagcctccatcaagaaagaaatgcgtttccgccggacctcgtcttgc
agtgatacggatacatctgagccatcattcatagacatgctgaagagcaccaagaaactg
gcacccgaaactgatgccaccgctggagctacagagtcattggatgctgctcaaggtggg
aaaagtggcaagaagaaagggaagaaaggcaggcagattgatcctgcccttcttggcttc
aaggtaacgagcaaccgcatcatgatgggtgagattcaacgccctgaggattag
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integrated database retrieval system
