Magnolia sinica: 131239439
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Entry
131239439 CDS
T09699
Name
(RefSeq) recQ-mediated genome instability protein 1 isoform X1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
msin
Magnolia sinica
Pathway
msin03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
131239439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msin03400
]
131239439
DNA repair and recombination proteins [BR:
msin03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
131239439
FA (Fanconi anemia) pathway
131239439
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
Motif
Other DBs
NCBI-GeneID:
131239439
NCBI-ProteinID:
XP_058093114
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All DBs
Position
3:8034429..8061805
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AA seq
751 aa
AA seq
DB search
MRRRLRLPTSSDEDEDRQTLISPNPNPNPNPNPSPNPSPLEIPDDDDFIDIPASPSPPPI
PPPPAATDLSCPIDAFLRNHGLRLQRQWLDSCISVLSSSQPGFTALDAAGKAKLCFEQFL
LSDMNVSGFGVLPENVHAMHGVELAGPFVLQEVSADSFDIFKLLNSWTAAVSSSNTVQHF
VQVDEIVNIGLPLRDRYHDAPAGYKRCLKLSMTDGAQLVFGMEYRPIRDLEVLAPAGLKV
CIRNVHIRRGLLMLVPEVLEVLGGLVEDLDAARQRLVQEVNKPPRGKRQRNGDAPSLATR
ARCAAWPSNTVNDHVPANVSRSLGTNPPQSLGQVATLATTGSNAGGRTSEGIAAPNSTRD
AESNPSSLNTVSDVATLATYGSNARGRAGEGFSSSTHRPNTRVDSSFLNNVSKSATLATP
SSDARGRPRRGFSAPSNVLDAEANSSFADAVVDVSTLATSCGDFGGRTREMFAAPSSMLD
ATGNSSFSETVSDVTTLARSGSDGGEKTSEGFGAPRSRPDGEASPSSNGVLNVATLSPTS
NCAVGSPKGPDTGSRRPASEAKPSSNTKEINKVDEVGHLLILSGDKEIPFTYLACLLAKW
TAKEDTSSFVHGKIKCFLTGVKGFQFRNRSTYELQVYVDDGSLISEVLIDHKVVQKGIRH
SPEEVNAALSSSDKKTVTSMKETMKQYQLYLAKFEGTMLVEINGLSPLPVALEMDQGCPS
SDAWLLLRRLRIFTAPESPQHNQFKPIDISP
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgcgtagaaggcttcgtctcccgacctcttccgacgaagacgaagatcgtcaaacccta
atctctccaaaccctaatcctaaccctaaccctaatccttctccaaatccctcccctctc
gaaatccccgacgacgacgatttcatcgacatccccgcctctccctccccccctccgatt
cccccaccgcccgccgcgacggacctatcctgtccgatagacgcgttcctgaggaatcac
ggactgcgcctgcagcggcagtggctggattcctgcatttccgtactgtcgagctcgcag
cccggtttcactgctctggatgctgctggaaaggcgaagctttgtttcgagcagttcctg
ctttctgatatgaatgtatctggattcggtgtgctgccggagaatgtgcacgctatgcat
ggtgttgagctggcgggccccttcgtcttgcaggaagtttctgctgacagctttgatatt
ttcaagctgcttaattcctggactgcagctgtttcttcatctaacactgtgcagcatttc
gtccaggttgatgaaatagttaatattggtttacctctacgagacaggtatcatgatgca
cctgccgggtataagaggtgcctcaaattgtcaatgactgatggtgctcaacttgttttt
ggaatggaatataggcctatcagagatcttgaagttttggctcctgctggtttaaaggtt
tgcattcgaaatgtacacatacgacgtggacttctaatgctggtcccggaagttttggag
gttctaggaggattggttgaggatttggatgcagcacgccagaggcttgtccaagaagta
aataagccacctcggggcaaaaggcaacggaatggtgatgctccttctttggccactaga
gctcggtgtgctgcttggccatccaatactgttaatgatcatgttccagcaaatgtttca
agatcactgggcaccaatccacctcagtcattgggccaagttgctactttggctacaact
ggcagtaatgccggaggaagaactagtgaaggtattgctgctcccaatagtacacgagat
gctgaatctaatccgtcatccttgaatactgtctcagatgtagctactttggccacatat
ggtagcaatgctagaggtagagctggagaagggttttcttcttctacacatagaccaaac
accagagttgattcatcattcttaaataatgtctccaaatctgcgactttggccacacct
agcagcgatgccagaggaagacctagacgagggttttctgctccaagcaatgtgctggat
gctgaagctaattcatcatttgcagatgctgttgtggacgtatctactttggctacatct
tgtggtgattttggaggaagaactagagaaatgtttgctgctcccagtagtatgctggat
gctacagggaactcatcattctcagaaactgtctcagatgtcactacgttggctagatcc
ggcagtgatggaggagaaaaaacttcagaagggtttggtgctcccagaagtaggccagat
ggtgaggctagcccatcctcaaatggtgtcttgaatgttgctactttgtctccaacaagt
aattgtgctgtaggaagtccaaaagggcctgatactggcagtaggaggccagcatctgaa
gctaaaccatcctctaatactaaggaaatcaataaggttgatgaggtgggacacctgctc
attctaagcggcgacaaagagattccttttacctatttagcttgtttgttagcaaaatgg
actgcaaaggaggacacatcatcgtttgttcatggtaaaattaagtgctttttgactggt
gtgaaagggttccagtttaggaatcggagtacatatgagctccaagtttatgttgatgat
ggtagtcttatctctgaggtcctcattgatcacaaagttgtgcaaaagggaataaggcac
tctccagaggaggttaatgctgctctttcttcttctgacaagaaaactgttaccagtatg
aaggaaaccatgaagcaatatcagctttatttggcaaaattcgagggtacgatgcttgtg
gagataaacggactctctcctcttccggttgcactggagatggatcagggttgtccatca
tctgatgcgtggctgctccttagaagactgagaatattcactgctcctgaatctccacag
cacaaccagtttaagcccatagacatatccccttga
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