Magnolia sinica: 131239528
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Entry
131239528 CDS
T09699
Name
(RefSeq) LOW QUALITY PROTEIN: chloride channel protein CLC-a
KO
K05016
chloride channel 7
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msin01009
]
131239528
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msin04131
]
131239528
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msin04040
]
131239528
Protein phosphatases and associated proteins [BR:
msin01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
131239528
Membrane trafficking [BR:
msin04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
131239528
Ion channels [BR:
msin04040
]
Chloride channels
Chloride channel (CLC)
131239528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
DUF7321
Motif
Other DBs
NCBI-GeneID:
131239528
NCBI-ProteinID:
XP_058093254
LinkDB
All DBs
Position
3:11914505..11922625
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AA seq
788 aa
AA seq
DB search
MDPNPIAEPTTATQMEGGEEHDPENNSLHQPLLKRSPTLSSNPLAIVGAKVSHIESLDYE
INENDLFKHDWRSRSKVQVLQYIFFKWTLAFLVGLLTGVVASLINLAIENITGFKLLAVA
RLVXERKYISGLLYFTGVNLALTLVASVLCVVFAPTAAGPGIPEIKAYLNGVNTPNMFGA
STLIVKIIGSIAAVSAGLDLGKEGPLVHIGSCIASLLGQGGPDNYRLKWRWLRYFNNDRD
RRDLITCGAASGVCAAFRAPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRGFMEY
CKSGNCGLFGKGGLIMFDVSGVTVSYHAMDLLPVVVIGIIGGVLGSLYNYLLHKVLRLYS
LINEKGKMHKVLLSLGVSLFTSACLYSLPFLARCSPCDPSLPDLACPTTGRTGNFKQFNC
PAGYYNDLASLLHSTNDDAVRNIFSTSTPTEFHLVSLLIFFFLYCILGLFTFGIATPSGL
FLPIILMGSAYGRLLGLLMSPYTKIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNL
LLLPITMLVLLISKTVGDTFNPSIYEIILHLKGLPFLDAHAELWMRNLSVGELAAAKPPV
VTLCGVEKVARVIHVLRNTTHNGFPVVDHEVVPPAGSRIGRVTELHGLVLRAHLVAVLRK
KWFLMERRRTEEWEVRERFTSVDLAERGRTIEEVEVTEDEMEMYIDLHPFTNTTPYTVVE
SMSVAKAVVLFRQVGLRHLLIVPKYQAAGASPVVGILTRQDLRAQNILGAFPHLANSKRR
ENVKVGHT
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggatccaaatccaatagcagaaccaacaacagcaacccaaatggaaggaggagaagaa
catgatcctgaaaacaattccctacaccagccattgctcaagagaagccccaccctctct
tccaatccattagctattgttggagccaaggtctctcacattgagagcttggactatgag
atcaatgaaaatgatctgttcaagcatgattggaggagtagatcaaaagtccaagtcctg
cagtacattttcttcaaatggactctggctttccttgttgggctcctcaccggggtcgtc
gcgtccctcatcaacctcgcgatcgagaacatcaccggcttcaagctgctcgctgtggcc
cgcttggttngagaaagaaagtatatatcagggctcctttatttcacgggtgtgaatcta
gcactgacattggttgcttcggttctctgcgtagtattcgcaccaactgcagccgggcca
ggcataccagaaatcaaagcttatctcaatggtgtcaatacacccaacatgtttggagct
tctacgctcatcgtcaagatcataggtagcattgcagctgtgtcagcaggccttgatcta
ggaaaagaaggcccactggtgcacattggttcatgcattgcctctttactaggccaaggt
gggcccgacaactaccgcctgaaatggcgatggctgcggtacttcaacaatgatagggac
cgaagggacctcatcacctgtggggctgcctccggcgtctgcgcggccttcagggcccca
gttggtggagtcttgtttgccctcgaagaagtcgctacatggtggcggagcgctcttctt
tggaggactttcttcagcactgccgtcgtcgtcgtggtgctccgcgggttcatggagtat
tgcaagtcggggaattgtgggctgtttgggaaaggtgggcttatcatgttcgacgtgagc
ggcgtgactgttagttaccatgcaatggatcttcttcctgttgttgtgattggaatcata
ggtggagttttgggaagtctatacaactatcttctgcataaggttctcaggctctacagt
ctcatcaatgaaaaggggaaaatgcacaaagttctactcagtctcggcgtctcgctcttc
acatccgcctgtctctactccctcccattcctggcccgctgctcgccatgtgatccctcc
ctccccgacttagcctgcccgaccacaggccgcactggcaacttcaaacaattcaattgc
cccgctggatactacaacgaccttgcgagcctcctccattccacaaacgatgatgcggtc
cgcaacatcttctccacctccaccccaaccgaattccatctagtgtccctcctcatcttc
ttcttcctctactgcatcttgggcctcttcacctttggcattgccactccctctggcctc
ttcctcccaatcatcctcatgggctctgcctacggccgcctcctcggcctcctaatgagc
ccatacacgaaaattgatcaaggcctatacgccgtcctaggggcagcgtctctcatggcg
gggtcaatgcggatgacagtctcactctgcgtgatcttccttgagctcaccaacaacctc
ctcctcctcccaatcacgatgcttgttctgctgatatcgaagacagtcggggacacattc
aatccaagcatctatgagatcatcctgcatctcaagggcctacctttcttggatgcccat
gccgagctgtggatgaggaacctcagtgtcggagaacttgcagccgccaagccgccagtc
gtgactctctgtggtgttgagaaggtggctcgggtcatccatgtcctccgcaacaccacc
cacaatggattccctgtcgtcgatcatgaggtagtcccgccggcggggtcgcgcattggc
agagtgactgagttgcatggactagtcctgcgagctcaccttgtcgcggtgctgaggaag
aagtggttcttgatggagaggaggaggacggaggagtgggaggtgagggagagatttacg
tctgtcgatctggcggagcggggacggacaatcgaggaggtggaagtgacagaggatgag
atggagatgtatattgatttgcatcctttcacgaacacgaccccgtacacggtggtggaa
agcatgtcggtggcaaaggcggtcgtgcttttccggcaagtgggcctccgccatttgctg
atcgtccccaaatatcaagcggctggggcatcacctgtggtggggatcttgaccagacaa
gatctaagggcccaaaatatcttgggtgccttccctcatctagctaacagcaagagaaga
gaaaatgtgaaggtgggccacacctag
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