Magnolia sinica: 131239698
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Entry
131239698 CDS
T09699
Name
(RefSeq) DNA polymerase I B, chloroplastic/mitochondrial isoform X1
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
msin
Magnolia sinica
Pathway
msin03030
DNA replication
msin03410
Base excision repair
msin03420
Nucleotide excision repair
msin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
131239698
03410 Base excision repair
131239698
03420 Nucleotide excision repair
131239698
03440 Homologous recombination
131239698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msin03032
]
131239698
03400 DNA repair and recombination proteins [BR:
msin03400
]
131239698
Enzymes [BR:
msin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
131239698
DNA replication proteins [BR:
msin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
131239698
DNA repair and recombination proteins [BR:
msin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
131239698
NER (nucleotide excision repair)
GGR (global genome repair) factors
131239698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
131239698
NCBI-ProteinID:
XP_058093516
LinkDB
All DBs
Position
1:complement(10970802..10996846)
Genome browser
AA seq
1345 aa
AA seq
DB search
MAMGVSTQGGPFKPCYTPSLWFSSSFRRSSSAVAATPFHAPGKGFQSVSNDRQEIHSLHS
ADDPCTSITSFGSPGMRHSSAMVNRQTVMKGGIDSIGAADYCCSSSRLLNFKVHSGLRSS
PSPNGHAFPLTSNNTISKGKYVPVVVYRRADDGNGAILHQEIVAWVDAIPTCRVSDYRIE
CRSSLSETYECNSRCLWLEESKKVKESRLNQQVRHNVGNDRMPFETPQDDVVVKAENEFD
GLRGGSTYERGGFSTTSLSSLRFDNIADKGAPQNSLSQQYIGYGMGDPQGMGELTRERES
HMPIPKCVSDGEIFPPKGGDNAIVGNHWITDDVHSSHVISPLNGVGVGGNKPHPIAMNSV
YHARQKEYTMVGTPHKMDLSEVKIAGKGVRPNGPSSLSNGQYIRPCELPAKGGNNTIPQN
HLINDDCRSSHAKIPSNRGGVGGSKNIVYHARTNEHIMVDTPQKVDLSAVEIVSRGVRSN
GSLAQKLLVESEVDASEVAGVRPGGVVERDGISDGGSSITDAFNDTYTVETTPKESGICR
NKHREQLARIYNEVLVVDDVLTAKRVVEVLTTRYKHLVHACDTEVAKIDVKQETPVGHGE
IICFSIYSGPQVDFGNGKNCIWVDVLDGGRDLLMEFAPFFKDPSIKKVWHNYSFDSHIIE
NYGFEVSGFHADTMHLARLWDSSRRTEGGYSLEALTGDPKVMSGANSHNEGELIAGKISM
KSIFGKKKLKKDGTEGKLITIAAVEELQRGDRIPWICYSALDSMSTLRLFESLKAKLMGM
DWVLDGVSRGSMYDFYEEYWRPFGELLVKMESEGMLVDRAYLSEIEKVATMEQQIAAERF
RKWASKHCPDAKYMNVGSDTQLRQLFFGGTVNSKDQNETLPEERTFKVPNVDKVIEEGKK
VATKFCNIKLHKIGEEMQTDMYTATGWPSMSGAALKTFAGKISGEYDSMDDVEGCQSADE
GDEISSERTLDEDEERGNPVASQEDADTSAYGTAYTAFGGGKEGREACHAIAALCEICSI
DSLISNFILPLQGSHISGTNGRVHCSLNINTETGRLSARRPSLQNQPALEKDRYKIRQAF
IAAPGNSLIVADYGQLELRILAHLANCKSMLNAFKAGGDFHSRTAMNMYPHIREAVEEKR
VLLEWYPQPGEDKPPVPLLKDAFASERRKAKMLNFSIAYGKTPVGLARDWKVSVKEARET
VNLWYKERREVLSWQQERKKEAHTKQCVYTLLGRTRRFPSLAHASNSHRGHIERAAINTP
VQGSAADVAMCAMLEISRNARLKELGWRLLLQVHDEVILEGPTESSEIAKAIVVECMSKP
FYGTNFLKVDLAVSAKCEQNWYAAK
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgggggtttccacacaaggcggccctttcaagccttgctacactccttccctc
tggttctcttcgtctttccgacgttcttcgtcggctgttgctgctactcctttccatgcc
cccggaaaaggcttccaaagtgtttcaaatgacaggcaagaaatccactctctccatagt
gcagatgatccttgtacttctatcacgagttttggttctccaggaatgaggcacagttca
gctatggtgaacaggcagaccgttatgaagggtggtatcgattcgattggcgctgcagac
tactgctgtagctcatctcgtcttttgaattttaaagtgcattctgggcttaggagctct
ccttctccaaatggtcacgcctttcctctcacttcgaataataccatttccaagggaaaa
tatgtgccagtggtggtttatagaagggcagatgatggaaatggagcaatccttcatcaa
gagatagtagcttgggtggatgctattccaacttgtagggtgagcgattacaggatagaa
tgcagaagtagtctatctgagacctatgagtgcaattccaggtgtttatggcttgaagaa
agcaaaaaggtgaaggaatcaagattgaatcagcaggttcgtcacaatgttggtaacgat
aggatgccatttgaaaccccacaagatgatgttgtggttaaagcggagaatgagttcgac
ggtttacgaggtggaagtacatatgagagagggggtttttccacgacatccttgtccagt
ctgagatttgataatattgctgataagggtgccccacaaaattcacttagtcaacaatac
attggttatggtatgggggacccacaagggatgggagagttaacccgggaaagggaatct
catatgccaatcccaaaatgtgttagtgatggagagattttccccccaaagggtggggat
aatgcaattgtggggaatcactggataactgatgatgtccattcttcacatgtaatatct
cctttaaatggagtaggtgttggaggcaataagccacaccccattgctatgaatagtgtt
taccatgctagacaaaaagaatacaccatggtgggtacccctcataaaatggatttgtca
gaggtgaaaattgctgggaaaggtgtccgtcctaatgggccatcatcattaagtaacggt
cagtacattcgtccttgtgaacttcctgcaaagggtggcaataatacaataccacagaac
cacttgattaatgatgattgccgttcttcacatgcaaagattccttccaacagaggaggt
gttggaggcagtaaaaatattgtctaccatgccagaacaaatgaacacatcatggtggac
acccctcagaaagtggatctgtcagcagtggaaattgttagtagaggtgtccgttctaat
gggtctttggcacagaaactgttggttgagagtgaggtggatgcttctgaagttgcagga
gttaggcctggtggggtggttgagagggatggcatatccgatggtggatcatccattact
gatgcttttaatgatacctacactgtggaaacaactcccaaagaaagtggcatttgtcgt
aataaacatcgggagcaacttgcacgcatctataacgaagtccttgtagttgatgacgtc
ttaactgcaaaaagagttgtcgaagtgctaacaacgcgatacaagcatcttgttcatgca
tgtgatacagaggtggcgaagatcgatgtgaagcaggagactcctgttggtcatggggag
atcatatgtttcagcatatattctggaccacaagtggattttgggaatggaaagaattgc
atatgggttgatgtgctcgatggtggccgggatctattgatggaatttgctcctttcttc
aaggacccatccattaaaaaggtgtggcacaactacagctttgatagtcacattatagag
aattatgggtttgaggtttctgggtttcatgcggatactatgcatctagctcgtctttgg
gattcttctagacgaactgaaggtgggtattctcttgaagcacttacaggcgacccaaag
gtcatgtcaggggcaaactcacacaatgaaggcgaactgattgctgggaagatatcgatg
aaatccatctttggcaagaaaaagctcaagaaagatggaaccgagggtaagcttatcact
attgcagctgtggaggagcttcaaagaggagatcggataccatggatctgttattccgcc
ttggattcaatgagcactctcaggctttttgagagcttgaaagcaaagctgatgggcatg
gattgggtccttgatggtgtttctagagggtccatgtatgacttctatgaagagtattgg
cgcccttttggtgagcttttggtaaaaatggaatctgaaggaatgctggttgatcgggcg
tatttatcagagattgagaaagtagcgactatggaacagcaaatagctgcagagagattt
aggaagtgggcgtcaaagcattgtcctgatgctaagtacatgaatgtagggagtgataca
caattgcgccagcttttctttggtggcactgtgaacagtaaggaccaaaatgagactctt
ccggaggagaggacatttaaagtgcctaatgtcgataaggtgattgaagagggcaagaaa
gttgctacaaaattttgcaacattaaactacacaagattggtgaggagatgcaaactgat
atgtatacagctactgggtggccttccatgagcggtgctgctctaaaaacctttgctggc
aagatctcaggagaatatgattcgatggatgatgttgaagggtgccaatcagctgatgag
ggtgatgaaatttcatctgaacgaacattagatgaagatgaagagagaggaaaccctgtt
gcaagtcaagaggatgctgatacatctgcttatggaacagcttacactgcatttggaggg
ggcaaggaggggagggaagcctgccatgctattgccgctttatgtgaaatctgctccatt
gactctttgatatcgaacttcattctccctttgcagggaagtcacatttctggtacgaat
gggcgtgttcattgttctttaaatatcaatactgagactggacggctgtcggctagaaga
ccaagtttgcagaatcagccagctttagagaaggaccgatacaaaatccggcaggcattt
atagctgcaccaggaaactctctcattgtggctgattatggacagctggagcttcggatc
cttgcgcatcttgcaaattgtaagagcatgttgaatgccttcaaggctggtggggatttc
cattcaaggacggcaatgaatatgtacccacacattcgcgaggctgtagaggaaaagagg
gtgttgcttgaatggtaccctcaacctggggaagacaaacctccagttcctctattaaag
gatgcgtttgcttctgagagaagaaaagcaaaaatgctcaacttctccattgcatatggg
aaaactcctgttgggctggcccgtgattggaaggtttctgtaaaagaagctagggaaaca
gtaaacctctggtataaagaaaggagggaagttctaagctggcaacaagagcgcaagaag
gaagcgcacacaaagcagtgtgtctatacactgctaggccggacccgccgttttccttcg
ctggctcatgctagtaactctcacaggggccacattgaacgagccgctattaacacccca
gtgcagggtagcgcggcagatgttgctatgtgtgccatgctcgagatatccaggaatgct
cgtttgaaggagcttggatggaggctgctcttgcaggtgcatgatgaagtcatattggaa
gggcccacagagtcatcagagatagccaaggcaattgtcgtcgagtgcatgtccaaaccc
ttctacggcaccaatttcctcaaggtcgatttagccgtcagtgccaagtgtgaacaaaac
tggtatgctgccaaataa
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