KEGG   Magnolia sinica: 131239999
Entry
131239999         CDS       T09699                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like isoform X1
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
msin  Magnolia sinica
Brite
KEGG Orthology (KO) [BR:msin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:msin03009]
    131239999
Ribosome biogenesis [BR:msin03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    131239999
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_EML_2 EIF3I Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_TEP1_2nd Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st ANAPC4_WD40 WD40_RFWD3 Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_SCAP WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_WDR75_2nd WDR54 WDR93
Other DBs
NCBI-GeneID: 131239999
NCBI-ProteinID: XP_058093964
LinkDB
Position
3:67328101..67352658
AA seq 490 aa
MAEMDGRGEAIVACSDKHTSAGICIWDVETGEDIMHIPTCASSSHGLLSLTNHFLVASQL
QKHGSYGGGAIFIWPLNKPQALLRSYPIEPIGPISCTRDGLFLFGGAPSGNVYVWDVSSG
RLLKNWRAHHKSMSCLALSDDDSFLISGADDGGICVWTLIRNNLILFNMICCSDRSDGSV
LDMADSQIRGSLPSFHCWLEHGASITGLLLTSGSSSSVLISSSLDGTCKVWDLAIGRLLQ
THTFSLAVTAIVLDPTEQFLFCGSADGRIFVNALDIGLQENPPIVSEDHSTVLSGHKGSI
TALSFTISGLWLISASEDCTACLWDVSNWQITRRFSHKKGRITNLVVIPRSSLSVMENQR
SSPRIRASLLEKAQMTKAYEGTTTLLPTYCSLEDHLNATCFRSSDSLNQQILDLEQGRTP
EAIQMKVETSVENRLWAVSMTKHLTTMNKHLRSRLLDLMERRLSPDFDITIEKRKRPKVN
DPEGRSMSPA
NT seq 1473 nt   +upstreamnt  +downstreamnt
atggcggaaatggatgggagaggtgaagccatagtagcttgcagtgacaagcacacgagt
gcaggcatatgcatatgggatgtagagactggagaggatatcatgcacatccccacatgt
gcatcctcatcccatggccttctttccttgactaaccacttccttgttgcttctcagctc
caaaagcatggttcttatggtggtggtgccatcttcatctggcccttgaataagcctcaa
gcattgctcagaagctatccaatagagcctattggaccaatttcctgcaccagggatgga
ttatttctttttggaggagctccttccgggaatgtgtatgtttgggatgtttcaagtgga
agactgctcaagaactggcgtgcacatcacaaatctatgagctgtcttgccctttctgat
gatgactcttttctcatttctggggctgatgatggtgggatctgtgtttggacattgata
agaaacaatttgattctctttaatatgatttgctgctctgatcgatccgatggaagtgtg
ctagatatggcagattctcaaatacgtggaagcttgccttcttttcactgttggttggag
catggagcctctataactggtctgttgttgacatctggcagttcaagttcagtactgata
tctagctccttggatggcacatgcaaggtttgggacctggccataggaaggctgctgcaa
actcacaccttttcattagctgtgactgcaattgttcttgatcccacagagcagtttttg
ttttgtggaagtgccgatggaaggatatttgtcaatgcacttgatatcggactgcaagaa
aatcctcccattgtttcagaggatcactcgacagttctcagtggacacaagggatccatc
actgctttgtcctttactataagtggactgtggctgatctctgcatcagaggattgcact
gcatgcctttgggacgtatcaaattggcagattactcgtagattcagccataagaaggga
cgaataacgaatctggtggtgatcccacggtcatcgctgtctgtgatggaaaaccagaga
agttcccctcggattcgtgcttctctgttggagaaggctcagatgaccaaagcatatgag
ggaacaaccactcttctacccacatactgttcactggaagatcatcttaatgctacttgt
ttccgaagctctgattcactcaaccaacagattttggatttggagcaggggagaacgccg
gaggcaatacaaatgaaggtggagacaagtgtggagaaccggctgtgggctgtgagcatg
acaaagcatttgacaaccatgaacaaacacctgcggtcacggttgttggatctgatggag
cgcaggttatctcctgactttgatatcaccattgaaaagagaaagaggcctaaggttaac
gatccagagggacgatcaatgtctcctgcttga

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