Magnolia sinica: 131240248
Help
Entry
131240248 CDS
T09699
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
msin
Magnolia sinica
Pathway
msin00040
Pentose and glucuronate interconversions
msin01100
Metabolic pathways
Module
msin_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131240248
Enzymes [BR:
msin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
131240248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
VacA2
Motif
Other DBs
NCBI-GeneID:
131240248
NCBI-ProteinID:
XP_058094357
LinkDB
All DBs
Position
3:complement(92911281..92915375)
Genome browser
AA seq
387 aa
AA seq
DB search
MAQYISFILSFIFFFFQLANGAYNIINFGAKADGRTDTARPFLSAWSAACASSQPATILV
PRGSYLLGPTNFKGPCENTKITIQIDGTFIAPSNYASLGPSGHWLYFDTVQGVSIYGGTL
DGQGKGLWACKAGNQNCPGGAPSLTFNNAKDILISGLTSINSQLYHVVINGCQSVMIQGV
KIIAPGNSPNTDGIHVQQSRGVTITRTGIKTGDDCISVGPGTMNLWVEQISCGPGHGISI
GSLGKDLQEAGVQNVTVKNAVFEGTQNGLRIKSWGRPSYGFVRGVVFQDAIMKNVQNPII
IDQNYCPHNQGCPGQHSGISISQVKYSNIQGTSATQVAVKFDCSAVNPCKGIGLQDVKLT
YQNQPAQSFCKNADGTSGGFVVPPSCL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggctcagtacatcagtttcattctctcctttattttcttcttctttcaattagccaat
ggagcctacaacataatcaactttggagccaaagctgacggtaggaccgacacagccaga
ccatttcttagtgcatggtctgctgcttgcgcctcatcccagcctgcaacaatcctagtg
ccccgtggatcatatttgctggggcccacaaacttcaaaggtccatgtgaaaatacaaaa
atcactattcagatcgacggcaccttcatcgctccgtccaattacgcatcactaggacca
tctggacactggttgtatttcgatactgttcagggcgtttcgatctatggcgggaccctc
gatggacagggaaagggcctatgggcctgcaaagcgggcaatcagaattgcccaggtggc
gcaccgtcactaaccttcaacaacgccaaagacatcttgatcagtggcctaacatcgatc
aacagccagctctatcacgtggtgatcaacggttgccaaagcgtgatgatccaaggggtc
aagatcatcgcacctggcaacagccccaacacggacggcatacatgtgcagcaatcaagg
ggtgtgactatcactcgcacaggcattaagacgggcgatgattgcatctcggtgggtcca
ggcacaatgaacttgtgggtcgagcaaatctcttgtgggcccgggcacggcatcagcatc
ggaagccttgggaaggacctccaagaagcaggggtgcaaaacgtgactgtaaaaaatgcc
gtatttgagggaacgcagaacggactgaggataaaatcgtggggaaggcccagttatggg
ttcgtcagaggcgtcgtttttcaggacgctatcatgaaaaatgtccaaaaccccatcata
atcgaccaaaattactgccctcacaaccaaggttgccctggtcagcattctggtataagc
atcagtcaagtgaaatatagcaacatccaaggaacttcggcgactcaagtggcggtgaaa
ttcgactgcagtgcggtcaatccatgcaaaggcattggtttgcaggatgtgaagcttact
tatcagaatcagccggcacaatctttctgtaagaacgctgatggaacgtctggcggtttt
gtggtcccaccgagctgtctgtaa
DBGET
integrated database retrieval system
