Magnolia sinica: 131240261
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Entry
131240261 CDS
T09699
Name
(RefSeq) polygalacturonase-like isoform X1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
msin
Magnolia sinica
Pathway
msin00040
Pentose and glucuronate interconversions
msin01100
Metabolic pathways
Module
msin_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131240261
Enzymes [BR:
msin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
131240261
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
131240261
NCBI-ProteinID:
XP_058094365
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Position
3:complement(93335772..93349216)
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AA seq
387 aa
AA seq
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MAQSISFILSLLFFFFQLTNGAYNIMNFGAKADGRTDTTRPFLSAWSAACASSQPATILV
PRGSYLLGPINFKGPCKNTKITIQIDGTFIAPSNYASLGPSGHWLYFDTVQGVSIYGGTL
DGQGKGLWACKAGNQNCPAGAESLTFHNAKDILISGLTSINSQLYHVVINGCQSVMIQGV
KIIAPGNSPNTDGIHVQQSRGVTITRTGIKTGDDCISVGPGTMNLWVEQISCGPGHGISI
GSLGKHLQEAGVQNVTVKNTVFEGTSNGLRIKSWGRPSYGFVRGVVFQNAIMKNVKNPII
IDQNYCPHNQGCPGQHSGIRISQVKYSNIQGTSATKVAVKFDCSAVNPCKAIGLQDVKLT
YQNQPAQSFCKNADGTSGGFVVPPSCL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggctcagtccatcagtttcattctctcccttcttttcttcttctttcaattaaccaat
ggagcctacaacataatgaactttggggcaaaagccgatggtaggaccgacacaaccaga
ccatttcttagtgcatggtctgctgcttgcgcctcatctcagcctgcaacaatcctagtg
ccccgtggatcctatttgctgggccccataaacttcaaaggcccatgtaaaaatacaaaa
atcactattcagatcgacggcaccttcatcgctccatccaattacgcatcactaggacca
tctggccactggctgtatttcgatactgttcagggcgtttcgatctatggtgggaccctc
gatggacagggaaagggcctatgggcctgcaaagcgggcaatcagaattgcccagctggc
gcagagtcactaaccttccacaacgccaaagacatcttaatcagcggcctaacatcgatc
aacagccagctctaccacgtggtgatcaacggttgccaaagcgtgatgatccaaggggtc
aagatcatcgcacctggcaacagccccaacacggacggcatacatgtgcagcaatcaagg
ggcgtgactatcactcgcacaggcattaagacgggcgatgattgcatctcggtgggccca
ggcacaatgaacttgtgggtcgagcaaatctcttgtgggcccgggcacggcatcagcatc
ggaagccttgggaagcacctccaagaagcaggggtgcaaaacgtgactgtaaaaaatacc
gtatttgagggaacctcgaacggactgaggataaaatcgtggggaaggcccagctatggg
ttcgtcagaggcgtcgtttttcagaacgctatcatgaaaaatgtcaaaaaccccatcata
atcgaccaaaattactgccctcacaaccaaggttgccctggccagcattcgggtataaga
atcagtcaagtgaaatatagcaacatccaaggaacttctgcaactaaagtggcggtgaaa
ttcgattgcagtgcggtcaatccatgcaaagccattggtttgcaggatgtgaagcttact
tatcagaatcagccggcacaatctttctgtaagaacgctgatggaacgtctggcggtttt
gtggtcccaccaagctgtctgtaa
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