Magnolia sinica: 131240617
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Entry
131240617 CDS
T09699
Name
(RefSeq) uncharacterized protein LOC131240617 isoform X1
KO
K07573
exosome complex component CSL4
Organism
msin
Magnolia sinica
Pathway
msin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131240617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131240617
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
131240617
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
131240617
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Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
131240617
NCBI-ProteinID:
XP_058094925
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Position
3:complement(107955777..107963694)
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AA seq
195 aa
AA seq
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MEGGEEVLVTPGEILGKESDIKAGRGAYVAPHNRTIYASLSGRRIFIHPSPHSPDQRPIV
EVVGHKAHGAVPEPGSVVIARVTKVMARAASADIMCVGPKSVREKFTGTIRQQDVRATEI
DKVDMHLSFRPGDIVRAVVLSLGDARAYYLTTARNELGVVSAESIAGGNMVPISWTEMQC
PLTGQVEQRKVAKAC
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaggggaggaggtgttagtaacacctggagagatattggggaaggaatctgat
ataaaagcgggtaggggtgcgtacgtcgccccccacaaccgtaccatctacgcctccctt
tccggacgccgcatcttcatccatccctcaccccattcccctgaccagagaccgatcgtg
gaagttgtcggccacaaggcccatggtgccgtcccagaacctggctccgttgtcattgct
cgagtaactaaagttatggctagagcagcttcagctgatataatgtgcgtcgggcccaag
tctgtgagagagaagtttacaggcacaattaggcaacaagatgttcgtgctacagaaatt
gataaagtggatatgcacttgtcttttcgccctggagacattgttagagctgtagttctc
tctcttggggatgcacgggcatattaccttaccactgcgaggaatgaactgggcgttgta
tctgcagaaagtatagcaggtggaaacatggttccaatcagttggacggagatgcaatgc
ccattgacgggccaagtcgaacaacgaaaggttgcaaaagcgtgttag
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