Magnolia sinica: 131240695
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Entry
131240695 CDS
T09699
Name
(RefSeq) protein CHROMATIN REMODELING 20 isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msin03000
]
131240695
03036 Chromosome and associated proteins [BR:
msin03036
]
131240695
Transcription factors [BR:
msin03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
131240695
Chromosome and associated proteins [BR:
msin03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
131240695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ADD_ATRX
AAA_34
PLAC9
Motif
Other DBs
NCBI-GeneID:
131240695
NCBI-ProteinID:
XP_058095091
LinkDB
All DBs
Position
3:complement(110428063..110531166)
Genome browser
AA seq
1611 aa
AA seq
DB search
MTEMDRQLKEAEESEVEDASNVTKMEGRPEEEEDASHVNRMEEQEEMEEAKVEDASNMAE
IKGQPKEVEDVLNTTEMEGQGKEVEHAELEEDPNLTDIEGQHKEVEDTELEAEENDSDDS
FIDDSDGEEPYTFDNDHETIVEAPMTDAEIEELVADFLEVESKAAEAQESLEKESLAQVE
REVRAELAQNLEGDDLEMAVSTEMKTFVEEWEKALDDLEAESALLLEQLDGAGIELPKLY
KWIESQAPNGCCTEAWKRRTLWVGSQATNEIAESIADAEKYLQSCRPVRRQRGRLVEEGA
SGYLGRKLSIEDNGDAPKEILEKDWSSFNDLIQSHKASDTSFGGKHWASVYLASTPQQAA
RLGLKLPGVDEVEEIDDIECTSSDPFYADALANEKDIDLSEEQKRNFRKVKEEDDANAAR
KLQINLKQRRRRNRCCQDNIKKEVSLVDRIVESELCDSMSLDESSHLVSVEKDSSETCEG
ARNINNKNISVQNKAEMIDTNGASGNLNKEKKLVNGTSSVLATCASSDSSELRGSKRAHD
GEDFEIDNKRSRTVVIDSDDEVRQEEHSASCNDPNMVGDSALQAKEAVDTVDATAHPSLS
PAGSGFDVTEDSKNFHCTACSKVLGAKEVHRHPLLEVIICGNCKDMLEEKMQQKDPDCSE
GYCGWCGSCNDLVTCKLCKSLFCTKCIRRNFGEERLSEIQTSGWSCCCCSPSLLHPFILE
CDKALKIDSQAVSSSDSDSEQSDAGGNVPRSNKKRRKRRIRRILDDAELGEETKRKIALE
KARQEHLKSMQVQFAGKSWGKISTSCNGNATVGTSVKVLGDATNGFIVNVAREADEVPVR
IPPSISAKLKPHQIAGIRFMWENIIQSVKKVKSGDKGLGCILAHTMGLGKTLQVIAFLYT
AMRGIDLGLRTALIVTPVNVLHNWRHEFDKWKPGELKRLRIFMLEDVPRERRLERLMTWR
AKGGVFLIGYTAFRNLSLGKHVRDKNTAIEMCQALQNGPDVVVCDEAHMIKNTRADITYA
LKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTS
DDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKIVFVITVKLSALQRKLYKRFLDAH
GFTGSNESSIRRRCFFAGYQALAQIWNHPGLLQMAKEHKDSLRREHAVENFVVDDSSSDD
NIDRDMLNGAERPRSKNDFAQKRNDNGFFREEIDWWRDLLHERTYRHADYSGKMVLLLEI
LSMSSEVGDKALVFSQSLTTLDLIELFLSKLPRKGREGKYWKPGKDWYRLDGSTEGSERQ
KLVERFNEPKNKRVKCILISTRAGSLGINLHAANRVIIVDGSWNPTYDLQAIYRVWRYGQ
TKPVYAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQIHRTMSKEEVLHLFDFGDEESA
DLEEGLLSSDIDVGGSLKPKPMHPSKLSCSSDKFMESLLSRHYPRWIANYHEHETLLQEN
EEERLSKEEQDMAWETFQRTMEWEEVNRVSIDGSALFDQRPTGDILRSMVEDKLTLTKSS
LRSQTIPRKCTSLAHLLTLTSQGTKPGSSTICGECSLEISWEKLHRDGKLR
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaatggacagacagctgaaggaagcagaagagtccgaagtggaagatgcctca
aatgtgactaaaatggaaggacgaccggaggaggaggaagatgcttcacatgtgaataga
atggaagaacaggaggaaatggaagaagccaaagttgaagatgcttcaaacatggctgag
ataaaaggacagccgaaggaggtagaagatgttttaaataccactgaaatggaaggacag
gggaaagaagttgaacatgctgaattggaagaggatccaaatttgactgacattgaaggg
caacataaagaagtggaagatacagaactagaagctgaggaaaatgattctgatgattca
tttattgatgactctgatggtgaagaaccgtatacatttgataatgatcacgaaaccatt
gttgaggcacctatgactgatgcagaaattgaagagttagttgcagattttttggaagtt
gagagtaaggcagcagaggctcaagaatcactcgaaaaggagtcactcgcacaagtggag
agagaagtcagagcagaattggctcaaaatcttgaaggggatgatctggaaatggccgta
tcgacggaaatgaaaacgttcgtagaggaatgggagaaggctcttgatgacctagaggcg
gagagtgcccttttgctggaacaacttgatggggctggtattgaacttcctaaactgtat
aaatggattgaaagtcaggcacctaatggttgctgcactgaagcttggaaaagacggaca
ctctgggtagggtctcaggcaactaatgaaattgctgaatcaattgcagatgcagaaaag
tatctgcaatcctgtcggcctgtaaggagacagcgggggagattggtggaggaaggtgct
agtggctatcttggaagaaaactttccattgaagataatggagatgcaccgaaagaaatt
ttggagaaggattggagctcatttaatgaccttattcaatctcataaggcatctgacact
tcctttggtggaaaacactgggcttctgtgtacttggccagtacaccccagcaagctgca
agattggggctcaagttgcccggagttgatgaggtggaggagatagatgacattgagtgc
acatccagcgatccattttatgccgatgcacttgcaaatgaaaaagatattgatctttct
gaagaacaaaagagaaactttagaaaggtcaaagaagaagatgatgcaaatgctgcacgg
aaattgcaaattaatttgaagcaaaggagacgtagaaatcgatgttgtcaggataacatt
aaaaaagaggtctccttagttgatcggattgtggaaagtgaattatgcgactccatgtct
ttggatgaatcttctcatctagtttctgtagagaaagattcttctgaaacttgtgagggt
gcacgtaatatcaacaataagaatatttctgtacaaaataaggctgaaatgattgacact
aatggagcttctggtaatctcaataaagaaaagaaattggtcaatggtacttcctcggta
cttgctacatgtgcgtcatctgattcgtctgaactcagagggtccaagcgtgcacatgat
ggtgaggatttcgaaatcgacaataaaagaagtcggactgttgtcatagatagtgacgat
gaagtgcgacaggaggaacattctgcttcttgcaacgatcccaacatggttggagattct
gcattgcaagctaaggaagcagttgatactgtagatgccactgctcatccttcattaagc
ccagctggttcaggttttgatgtgacagaagattctaagaattttcattgcactgcttgt
tccaaagtcttgggagctaaagaagtgcaccgtcatccacttttagaggtcatcatatgt
ggaaattgcaaggacatgctggaagaaaagatgcaacaaaaggatcctgattgctctgag
ggttattgtggatggtgtggaagttgcaatgatcttgtaacttgtaaactgtgcaagtca
ttattctgtaccaaatgtataaggaggaattttggagaagaacgcctgtcagaaattcaa
acctctggttggagctgttgctgctgttctccctctctattgcacccatttattcttgaa
tgcgacaaagctctcaaaattgatagtcaggcagtttcaagttctgatagtgattccgag
caatcggatgcaggcggcaatgttccaagaagcaataagaaaagacgtaaaagaaggatt
aggagaatccttgacgatgctgaacttggagaagagaccaagcggaaaattgcacttgaa
aaggcacgtcaagaacatctcaagtcaatgcaagtacagtttgctggcaaatcatggggt
aagatcagcacaagttgtaacggaaatgctacagtaggtacaagtgttaaagtgctgggt
gatgcaacaaatggtttcatagtgaatgttgcaagggaggcagatgaagtgccagtgagg
attcctcctagtatctctgccaaactgaaaccccatcagattgctgggatacgatttatg
tgggaaaatatcatacagtctgtcaaaaaggttaaatctggcgataaaggtcttggttgc
attctagctcacaccatgggccttggaaagactctccaggttatagcatttttgtacact
gctatgcgaggtattgatttaggattaagaactgcacttatagttacacctgtaaatgtg
ttgcacaactggcggcatgagttcgacaagtggaaacctggggaattaaagcgtctccgt
atctttatgctagaagatgttcccagggagagaaggttggagcggctcatgacgtggaga
gctaagggtggtgtctttttgattggctacactgctttccgtaacttatctctgggaaag
catgtgagagataagaatacagccatagagatgtgtcaagcacttcagaatgggcctgat
gttgtagtctgtgatgaggcccatatgattaagaacacaagagctgatatcacctatgcc
ttgaaacaagtgaagtgccaaagaagaattgcattaactggatcaccattgcagaacaac
ctgatggaatattattgtatggttgattttgtaagagaaggttttcttgggagcagtcat
gaatttaggaaccggttccaaaatcctatagagaatgggcagcatactaattctacctca
gatgatgtaaaaattatgaaccaaaggtcacatatcctttacgagcaattaaaaggattt
gtacaacggatggacatgaacgtggtgaagaaggacctgcctcctaaaattgtttttgta
attactgtaaagctttcagctttgcaaaggaagctatacaaaagattcttagatgcacat
ggtttcacgggttctaatgagagctctataaggagaaggtgcttttttgctggatatcag
gcgttagctcagatatggaaccatcctgggctcttacaaatggccaaagaacacaaagac
agcctaagacgtgaacatgctgttgagaactttgttgttgatgacagttctagtgatgat
aacatcgaccgtgatatgctgaatggagcagagaggccaaggagcaagaatgatttcgca
cagaagagaaatgataatggctttttccgtgaggaaattgactggtggagagatcttcta
catgaaaggacttaccggcatgcggattatagcggcaagatggttttgttgcttgagatc
ctatctatgagttcagaggtgggcgacaaggcactagtttttagccagagcttgacaacg
ctggatctcatagagctgtttctatcaaaattaccaaggaaagggagggaaggcaaatat
tggaaaccaggaaaagactggtataggcttgacggaagtacggagggctctgaaaggcaa
aagcttgttgagaggtttaatgaacccaaaaataaaagggttaaatgcattttgatatca
actcgggctggatcattgggcatcaaccttcacgctgctaaccgtgtaatcattgttgac
ggttcgtggaaccccacttatgatcttcaggctatatatcgagtttggaggtatgggcaa
acaaagccagtttatgcatatcgtttgatggcacatggaactatggaagaaaaaatatat
aaacggcaggtgacaaaggagggacttgctgcaagggtggttgataggcaacaaatacat
cgaaccatgtctaaggaggaggtcctgcatctctttgattttggtgatgaagagagtgca
gatttagaggagggccttcttagctctgatatagatgttggaggttctttgaagccgaaa
cccatgcatccttctaaactgagctgctcttccgacaagttcatggaaagcttgctcagt
agacattatccacggtggatagcaaattaccacgagcatgaaacactgctgcaagagaat
gaggaggagaggctatcaaaagaggagcaagacatggcctgggaaacattccagcgaaca
atggagtgggaagaagtgaatagggtttccatcgatgggtctgcattgtttgaccagagg
cccactggtgacatccttagaagcatggtggaggacaaactgacactaaccaagagcagc
ttgaggagccaaacgatcccgcggaagtgcaccagcctcgcgcacttgctaaccctgaca
agccaaggcacaaaacccgggtcgagcaccatctgtggtgagtgctcgctggaaatcagt
tgggagaagctacacagggatgggaagttgaggtaa
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