Magnolia sinica: 131240700
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Entry
131240700 CDS
T09699
Name
(RefSeq) probable pectate lyase 8 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
msin
Magnolia sinica
Pathway
msin00040
Pentose and glucuronate interconversions
msin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131240700
Enzymes [BR:
msin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131240700
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
131240700
NCBI-ProteinID:
XP_058095101
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Position
3:complement(110760047..110766842)
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AA seq
445 aa
AA seq
DB search
MAASLKCFSLLFLLLLLFVGALARVGSEEMQNSRTTEAEHSFKEDPAKEALKADRSEWKA
GEHVVDDPETVASEVDRSIKNSTERRNLGFLSCGTGNPIDDCWRCDPNWHLHRKRLADCG
IGFGRNAIGGRDGRIYVVTDPGDDDPVNPRPGTIRHAVIQEEPLWIVFKRDMVITLKQEL
IMNSFKTLDGRGSNVHIANGACITVQFITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWRT
MADGDAVSIFGSSHIWVDHCSLSNCADGLVDAVMGSTAITVSNNYFTHHNEVMLLGHSDS
YTRDKGMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGN
RYLAPVNPFAKEVTKRVDTDTSVWKGWNWRSEGDLLLNGAYFTPSGAGASASYSRASSLG
AKSSSMVASITSGAGVLSCRSGSQC
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttctctgaaatgcttttctctgctgtttttgcttctgttgctgttcgttgga
gctctggcgcgagtcggaagcgaggagatgcagaattcgaggactacagaagcagagcat
agcttcaaagaagatccggcaaaagaagcgttaaaggcagataggtcggagtggaaagca
ggggagcatgttgtggatgatccagagacggttgcctctgaagttgataggagcataaag
aacagtacagaacggaggaacctcggctttctttcctgtggcaccggcaaccccatcgac
gactgctggcgttgtgaccccaactggcacctacaccgcaagaggttggctgactgtggg
attggcttcggacgcaatgccatcggtggacgcgatgggcgtatctatgtggtcactgat
cccggtgatgatgatcccgtcaaccctcgccctggcaccattaggcatgctgtcatccag
gaagagcccctctggatcgtgtttaagcgtgatatggtgatcaccctgaagcaagagctc
atcatgaacagcttcaagacccttgatggccgtggctccaatgtccacattgcgaacggt
gcttgcataaccgttcaattcatcactaatgtcatcatccatggtctccatatccatgac
tgcaagcccaccggcaatgcgatggttcgcagctccccatcccactatggatggaggacc
atggcagatggtgatgctgtctccatctttggttccagccatatctgggtggaccattgc
tccctctccaactgtgccgatggccttgtcgatgctgtcatgggctccactgccatcacc
gtctccaacaactacttcacccaccacaacgaggtgatgttattgggccatagcgattct
tacacaagagataaggggatgcaggtgaccattgcttacaaccactttggcgaaggtctc
attcaaagaatgccaaggtgcaggcatgggtatttccatgtggtgaacaatgactacact
cactgggagatgtatgctattggtggaagtgctgaacccaccatcaacagccaaggaaat
cgatacctcgcccctgtcaaccccttcgccaaggaggtgaccaaaagggtggacacggac
acaagcgtgtggaagggctggaactggcgatcggagggcgacttgctgctgaacggcgcc
tactttaccccttcaggtgctggtgcttcagctagctattccagggcctccagtcttgga
gcaaagtcatcttccatggttgcctccatcacttcaggggccggtgttctatcgtgccgc
agtggatctcagtgctaa
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