Magnolia sinica: 131241136
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Entry
131241136 CDS
T09699
Name
(RefSeq) uncharacterized protein LOC131241136
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msin03009
]
131241136
04121 Ubiquitin system [BR:
msin04121
]
131241136
Ribosome biogenesis [BR:
msin03009
]
Eukaryotic type
90S particles
Other 90S particles
131241136
Ubiquitin system [BR:
msin04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
131241136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Sof1
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
NBCH_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
WDR90_beta-prop_4th
eIF2A
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_NUP159_NUP214
PROPPIN
VID27
Beta-prop_Vps41
LuxS
Motif
Other DBs
NCBI-GeneID:
131241136
NCBI-ProteinID:
XP_058095796
LinkDB
All DBs
Position
3:124307675..124330339
Genome browser
AA seq
452 aa
AA seq
DB search
MKVKVISRSTDEFTRERSQDLQRVFRNYDPNLRPQEKATEYVRALNAAKLDKIFAKPFIG
AMDGHIDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIASRRTVCQFPGHQGAVRGLAASTD
GRVLISCGSDCTVRLWNVPVANTLGSDDSSDNSSEPLAVYVWKNAFWAVDHQWDGDLFAT
AGAQVDIWDHNRSQPVNSFEWGKDTVISVRFNPAEPDVLATSASDRSITLYDLRMSSPAR
KLIMKTKTNAISWNPREPMNFTAANEDCNCYSYDSRKLNEAKCVHQDHVSAVLDIDYSPT
GQEFVTGSYDRTVRIFKYNGGHSREIYHTKRMQRVFCAKFSCDASYVISGSDDTNLRLWK
AKASEQLGVLLPRERKKQDYLEAVKERYKHLPEVKRIVRHRHLPKPIYKAASLRRTMVEA
ERRKEERRRAHSAPGSMPREPFRKKRILTEVE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttaaggtgatttctcggtctaccgacgaattcacccgagaacgtagccaagat
ctccagagggttttccgaaactatgatccaaacttacgtccccaagaaaaggccactgaa
tatgttcgtgcccttaatgctgcaaagttggataagatatttgcaaaacctttcattgga
gcaatggatgggcacattgatgctgtctcttgtatggcaaagaacccaaatcacttgaaa
ggaatattctcgggttcaatggatggagatattcgtctctgggatatagcatcgaggcgg
acagtttgccagttcccaggccaccaaggtgctgttcgaggtttggcagcatctacagat
ggacgggttctcatatcctgtggaagtgattgcactgtcaggctttggaatgttcctgtt
gcgaatactctagggtcagatgattcatctgataattcatcagagccactggcagtttat
gtttggaagaatgctttctgggctgtagatcaccagtgggatggtgatctctttgcgaca
gctggtgctcaggttgatatatgggaccacaacaggtcacagccagtgaacagttttgaa
tgggggaaggacactgttatttctgttcgatttaatccagcagaaccagacgtcttagca
acatcagctagtgaccgcagcataacactatatgatctgcgtatgtcatcaccggcaagg
aagcttatcatgaagacaaaaactaatgctatttcttggaacccaagggagccgatgaat
tttacagcggcaaatgaagattgcaactgctatagctacgactcgagaaaactaaacgaa
gccaagtgtgtgcaccaagatcatgtttctgcagtgttggatattgattactctccaact
ggccaggaatttgtaactggctcttatgataggacagtgagaatcttcaagtacaatggt
ggccatagcagggaaatttaccacaccaagaggatgcaaagggtattttgtgcaaagttt
agctgtgatgcctcttatgttatttctgggagtgatgacaccaacctgcggctatggaaa
gccaaggcatcagaacaattgggggttcttcttcctagggagcggaaaaaacaagattat
cttgaggccgtcaaggagcgttacaagcaccttcctgaggtcaagcgcattgttaggcat
agacacttacctaagccaatatacaaggcagcctccctcaggcgtaccatggttgaagca
gaaaggaggaaagaggagaggaggagagctcacagcgctccaggcagcatgccccgggaa
ccattccggaagaaaagaatccttacagaggttgagtga
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