Magnolia sinica: 131241196
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Entry
131241196 CDS
T09699
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
msin
Magnolia sinica
Pathway
msin03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
131241196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msin03400
]
131241196
DNA repair and recombination proteins [BR:
msin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
131241196
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
DUF1400
Motif
Other DBs
NCBI-GeneID:
131241196
NCBI-ProteinID:
XP_058095904
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All DBs
Position
3:126118067..126124297
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AA seq
655 aa
AA seq
DB search
MEGEKLLALIEKATNSTSQEVDPRLLKAVKSTVRSSDDNVRIAIDSLMQKMKKDHSQVRY
LTLLIIDELFMRSKLFRSLLVVNFDNFLSLSVGFRRNLPLPPPRAVASTLRSKSIELLEK
WNASFGIHYRQLRLGFEYLKNTLKFQFPNRLENAARLQQERREREIRSKEILLSKYGTLK
ENYASIKGEIQSTLDEIGECLDIICVKEDEFIHTNSVEDGEAEEYSSALQQIRLESLKEG
EKVSENSDNKAVFDVLRDLYKLLLSRHLPLVQELVSVLVRVDLADNKFRDFMLKEFIDIR
KILQSLKKRCEQTGCALHSTAAQEEEDLWEEGKIEVPDNENARMPTRSSKEIVSTSTTNA
DQGKVPDHGKKLKGKALNLEGDGSDSTSPRVKLLAEAPVMPWGSFLDNWGSDRDFLANQR
GLELEGHWGRVDYDAVIPAEKIAELNVQTTLYKEQKVEIQPCLAPMSKGGLCQRRDLRVC
PFHGPIVPRDAEGIPIHQNLSTDEKAVEDLLTGFLDGEDDHDLGNTMAKKLAKQAVKNVR
NRDREEEKKRENDRRSLKRAKLAKVREHNEAVLRESALASTSRSEAVEEDLVMGNQGGPI
VRGKKQTLSSMLREKVTTKDRIARRLLNTRVTDAAIRQLRQVEEANYKEAYPNQW
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagagaagctgttagccctaatcgagaaagctaccaattctacatcccaagaa
gtggaccctcgccttctcaaagccgtcaaatccaccgtccgatcttccgatgacaacgtt
cgcatcgccatcgattccctcatgcagaaaatgaagaaagaccactcccaggtacggtac
ctcactcttctcatcattgatgaactgttcatgcgttcaaagcttttccgatccctcctt
gttgttaacttcgataactttctgagcttaagtgttggtttccgaagaaatttgccactc
ccccctcctcgtgccgttgcatccaccttgcgttcaaaaagcatagaattgttggagaag
tggaatgcttcatttgggattcattacaggcagcttaggttaggcttcgagtacctgaag
aataccttaaaatttcagttccctaaccgcctggaaaacgcagctcgattacaacaagag
aggagggaaagagagattaggtcgaaggagattttgctgagtaagtatggaaccttgaag
gaaaactatgcttcaatcaagggtgaaatacagtctacgcttgatgaaataggagaatgc
ttggacattatttgtgtcaaagaagatgaatttatccacaccaattctgttgaggatgga
gaggctgaagaatacagctctgccttgcagcagatccgtctagaatcactgaaagagggg
gaaaaggttagtgaaaacagcgacaataaggcggtttttgacgtattgagggacttgtac
aagcttctactgtcgaggcatttgccattggtgcaagaattggtgtctgttcttgtgagg
gtcgatctggctgacaacaagtttagggattttatgctaaaagagttcattgatatccgg
aaaattcttcaatcattaaaaaagagatgcgagcaaacgggctgtgctcttcatagtact
gctgcccaagaagaggaggatctgtgggaagagggtaagattgaagtgcctgacaatgag
aatgctagaatgcctacaagatcaagcaaagaaatcgtgagcacttcaactaccaatgca
gaccagggcaaagtcccggatcatggtaaaaaattgaaaggcaaggcattaaatcttgaa
ggagacggttcggattcaacatctccgagggtgaagcttttggctgaagctccagttatg
ccatggggctccttcttggataattggggttcagaccgtgattttctggcaaaccagagg
ggcttggagctcgagggtcattggggcagagtagactatgatgctgttattcccgcagaa
aaaattgctgagctgaatgttcaaacaacactatacaaggaacaaaaagttgaaattcaa
ccgtgccttgctcctatgagcaaaggtgggctttgtcaaagaagggacttgagggtatgc
ccatttcatgggcctatcgtacctcgtgatgctgaaggaattccaatccatcaaaacctg
tcaacggatgagaaagctgtggaagatttgttgactggttttttggatggtgaggatgat
catgatttaggcaatacaatggctaagaaactagcaaaacaggcagtgaagaatgtgcgg
aacagagacagagaggaagagaagaagagagaaaatgataggcggtcattgaagcgtgca
aagcttgcaaaggtccgtgagcacaatgaagcagttttacgggaatctgcacttgcatca
acttcccggtcagaagctgttgaagaggacttagtgatggggaaccaaggtgggcctatt
gtcagaggaaagaagcagacattgtcatctatgctacgtgagaaagtaacaacaaaggat
agaatagcacggaggcttttgaacacccgtgtaacagatgcagcaataagacagctgaga
caggtggaggaagcaaattacaaggaagcttatccaaatcagtggtag
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