Magnolia sinica: 131241203
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Entry
131241203 CDS
T09699
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
msin
Magnolia sinica
Pathway
msin04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131241203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msin04121
]
131241203
Enzymes [BR:
msin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131241203
Ubiquitin system [BR:
msin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
131241203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
FAIM1
ARM_LIN_2nd
Motif
Other DBs
NCBI-GeneID:
131241203
NCBI-ProteinID:
XP_058095912
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All DBs
Position
3:126228455..126235973
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AA seq
318 aa
AA seq
DB search
MELDSIECVSSSDGIDEEELHYHQISKVHSNGSSNTNSSVSSAISPATSVHELLECPVCT
NSMYPPIHQCHNGHTLCSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLG
CPEIFPYYSKLKHELQCNFRPYNCPYAGSECSVVGDIPFLVAHLRDDHKVDMHTGCTFNH
RYVKSNPREVENATWMLTVFNCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETEARNFSY
SLEVGANSRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRI
WKEQQNPDAGVCIPNLCN
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggaattggatagcattgaatgcgtatcctcgtcggatgggatcgacgaggaagagttg
cattaccatcagatctcaaaggtccacagcaacggcagcagcaacaccaacagtagcgtc
tcgtcggcgatttctccggctaccagcgtacatgagctcctcgaatgccccgtttgcacc
aattccatgtacccgccaatccaccagtgccacaacgggcacactctgtgttctacctgt
aaatcaagggtacataacaggtgccccacttgcagacaggagcttggagacataaggtgt
ttagcattggaaaaggtggccgagtcgcttgaactgccatgcaagtactgctcattaggc
tgcccagagatcttcccgtactacagcaagctcaaacacgaacttcagtgtaacttcaga
ccatacaactgcccgtatgcaggatctgaatgctctgtcgttggagatattccttttctt
gttgcacatctgagggatgaccacaaagtagacatgcacacaggatgcacattcaatcat
cgttacgtcaagtctaatccccgtgaggttgaaaatgccacctggatgctaacggtcttc
aactgttttgggcagtacttctgcttgcactttgaagccttccagcttgggatggctcct
gtctacatggcattcctccgcttcatgggcgatgaaactgaggctaggaacttcagctac
agccttgaggttggggccaacagcaggaagctcatatgggaaggcacccctcggagcatc
cgcgacagccacaggaaagtccgcgacagccacgacggtctcatcatccagaggaacatg
gccctcttcttctcgggcggcgacaggaaggagctgaagctgcgggtgacgggtcggata
tggaaggagcaacagaacccagatgctggagtatgcatacccaacctgtgcaactga
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integrated database retrieval system
