Magnolia sinica: 131241235
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Entry
131241235 CDS
T09699
Name
(RefSeq) long chain acyl-CoA synthetase 4-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
msin
Magnolia sinica
Pathway
msin00061
Fatty acid biosynthesis
msin00071
Fatty acid degradation
msin01100
Metabolic pathways
msin01212
Fatty acid metabolism
msin04146
Peroxisome
Module
msin_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
131241235
00071 Fatty acid degradation
131241235
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
131241235
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
msin01004
]
131241235
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msin04147
]
131241235
Enzymes [BR:
msin01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
131241235
Lipid biosynthesis proteins [BR:
msin01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
131241235
Exosome [BR:
msin04147
]
Exosomal proteins
Exosomal proteins of breast milk
131241235
Exosomal proteins of breast cancer cells
131241235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
131241235
NCBI-ProteinID:
XP_058095957
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All DBs
Position
3:127309157..127332226
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AA seq
659 aa
AA seq
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MTEKKFIIEMEKAKDATEGRPSVGPVYRSVFAKDGFPPHVEGMESCWDVFRLSVEKYPRN
KMLGHRQIVNGKPGEYVWLTYKEVYDIVIKVGHSIRSCGVEPGGRCGIYGANCPEWVMSM
EACNAHGIYCVPLYDTLGAGAVEFIICHAEVSIVFVEEKKITEVFKTFHNTTKFLKTIVS
FGKVTTEQREQTEKFGLTIYSWDEFLLLGDNQHFDLPVTTKTEICTIMYTSGTTGDPKGV
LISNDSIITLIAGVKRLLQSANEQLNEEDVYLSYLPLAHIFDRVIEELFISHGASIGFWR
GDAKLLIEDIGELKPTIFCAVPRVLDRIYTGLTEKISSGGFLKRTLFNIAYEYKQHNMRK
GSKHVEAAPLFDKVVFSKVKQGLGGKVRLILSGAAPLATHVEAFLRVVACAHVLQGYGLT
ETCAGTFVSLPNELSMLGTVGPPVPNVDVCLESVPEMGYDANSSTPRGEICVRGNTLFSG
YFKREDLTKEVMVDGWFHTGDIGEWQSNGSMKIIDRKKNIFKLSQGEYVAVENLENIYGE
VSEIDSIWIYGNSFESFLIAIVNPNKQALDLWAEENGQSGDFAALCENPKAKEYILGELT
KHAKAKKLKGFEIPKAVHLDPVPFDMERDLLTPTYKKKRQQLLKYYQSVIDDMYKNAAK
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgacggagaagaaattcatcatcgagatggagaaggcgaaggacgcgacggaagggagg
ccgtccgtcgggccggtttaccgaagcgtcttcgctaaggacggatttcctccgcatgtg
gaaggaatggagagctgctgggacgttttccgcctttctgttgagaagtatccgagaaac
aagatgcttggccaccgtcagattgtgaatgggaagccaggtgaatatgtgtggctaact
tacaaagaagtgtatgacatagtaataaaagttggacattctatccgtagttgtggtgtt
gagccgggaggccggtgtggtatctatggtgccaattgtcctgaatgggttatgagtatg
gaggcttgcaatgctcatggcatttattgtgtccctttatatgatacactcggtgctggt
gcagtggaatttattatatgccatgcggaggtttcaattgtttttgtggaagaaaaaaag
atcactgaggtgtttaaaacatttcataatacaaccaaattcttgaaaacaattgtgagt
tttggcaaggttacaactgaacaaagagaacaaactgaaaagtttggtttgacaatatat
tcttgggatgaatttttgctactgggggataatcagcactttgatcttccagtaacaact
aagaccgagatctgtacaataatgtatactagtggaacaacaggtgaccctaagggagtt
ctgatttccaatgatagcattattactctaattgccggcgtgaagcggctgcttcagtcc
gcgaatgaacagttgaacgaggaggatgtttatttatcttatctccctctggcacatatc
tttgatcgggtgattgaggagttgtttatttctcatggtgcctcaataggattttggcgt
ggggatgcaaaactattaattgaagacattggggagctaaaaccaactattttctgtgct
gttccacgtgtgctggatcggatctatacaggtctgacagagaagatttcttcaggaggt
ttcttgaagcgtacattgtttaacattgcatacgagtacaaacaacataacatgcggaag
ggatctaaacatgtagaggcagcaccactttttgacaaagtagttttcagcaaggtaaag
caaggattaggcggaaaagtacgacttattttatctggagctgctccacttgcaacacat
gtggaagcttttctacgggtggtggcatgtgctcatgttctacaaggctatggtctgacg
gaaacttgtgcggggacatttgtctcactaccaaatgaactatcaatgcttggtacagtg
ggccctcctgtgccaaatgtagatgtgtgcctggagtctgttcctgaaatgggatatgat
gccaattcaagcacaccacgtggagagatttgtgtaaggggaaataccctgttctcagga
tactttaaacgagaagacctcacgaaagaagtcatggttgatggatggttccacacaggg
gatatcggcgagtggcagtcaaatgggagtatgaaaatcattgacaggaaaaagaacatt
ttcaagctttcacaaggagaatatgttgcggttgaaaatctggagaacatctatggtgaa
gtttctgaaattgactcgatatggatatatggaaacagcttcgagtctttcctcatcgcc
attgtcaatcccaacaagcaagcacttgacttgtgggctgaggagaatggccaaagtggg
gattttgctgctctctgtgagaatcccaaggcaaaagaatacattcttggggaacttaca
aagcatgccaaagcaaagaagttaaaaggttttgaaatcccgaaagctgtccatcttgac
ccagtaccatttgacatggagcgagaccttctcaccccaacctacaagaaaaagcggcaa
cagttgctcaaatattaccagagcgtcattgatgacatgtacaagaatgcagccaagtga
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