Magnolia sinica: 131241315
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Entry
131241315 CDS
T09699
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msin03021
]
131241315
Transcription machinery [BR:
msin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
131241315
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Motif
Other DBs
NCBI-GeneID:
131241315
NCBI-ProteinID:
XP_058096094
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All DBs
Position
3:129790090..129813081
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AA seq
516 aa
AA seq
DB search
MGVVTVSSSASQTPFGVGTRFSTHRSASRRPFFLAFKTDKSKNPALVAPQESIPLPIDAP
KDVHKSLRRPRGKPPKRVKAISSDRASACTIDLDYNEAAAKLENIYKLSPADVSDVEESN
HSVQKRRRTRKRMGEGNENDEREAGKVVRNRRRKTKRLSLENRIILMQKKEQEGEAVSSN
LRRGDGEKGYDVDKLVRGYSVATDLVSLDWKKMKIPPVLPSSEHAWLFKLIQPMKALLQV
KEGLQKDLGRAPTDGELAAATNMRVAKVKRNIEVGRAARNKLIKHNLRLVLFVINKYYQE
IANDQKFQDLCQAGAKGLITAIDRFEPKRGFRLSTYGLFWIRHGIIRSMTVSSFTRVPFG
IESVRQEIQKAKLELLFDLRRLPTDEEIVAKVGISPERYQDIIRASKQIFSLNARHMTTQ
EEFIKGIADIDGVGADKRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEI
AGNLNISREMVRKHEVKALMKLKHPARVDYLRRYID
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttgtgactgtttctagctcggcttctcagactccattcggtgtgggcacaaga
ttctcaactcatcgttctgcatcaagaagacccttcttcttggcttttaagacagataaa
agcaagaacccagctttggttgcaccccaagagtccattcctctacccatagatgcacct
aaagatgtccataaaagcctaaggagacccagaggcaaacctccgaaaagagtaaaagca
atctccagtgatagagcttcagcttgcactatagacttggattataacgaagctgcagca
aagcttgagaacatatataagctcagcccagcggatgtttctgatgtggaagaatcaaat
cattccgtccagaaacgtcgtaggacaaggaagagaatgggagaaggcaacgagaatgat
gagagagaggcgggtaaagtggtgagaaaccgtagaaggaagacgaagcgtttgagtctt
gagaataggataatcctaatgcagaagaaagaacaagaaggagaggctgtcagttcgaat
ctcaggagaggagatggtgaaaagggttatgatgtcgataagcttgttagggggtattct
gtcgcgactgacttagttagcttggattggaagaagatgaagataccaccagttctccct
tcttctgaacatgcatggctattcaagctgatacaaccaatgaaggcactgcttcaagtg
aaggagggactgcagaaagatttgggtagggcgcctactgatggtgaactagcagctgca
acaaatatgagagttgcaaaggtgaaaagaaacatagaggtcggtcgagctgcaagaaac
aagctaatcaagcacaatcttcggctagttttatttgtaatcaacaaatattatcaagag
atcgcgaatgatcagaaattccaagacctttgccaagcaggggcaaagggtctcatcaca
gccattgatcggtttgaaccaaagcgcggttttcgactatcaacctatggtctattttgg
atccgacatggtataatacgctccatgacagtgtcaagcttcacgcgtgtcccatttggc
attgaatcggttagacaggagatccagaaggccaaattagagttgttatttgacttgcga
aggttaccaacagatgaagagatagttgccaaagtaggaatctccccagagagatatcag
gatatcataagggcatcgaaacaaatattttccctcaatgcaaggcatatgaccactcaa
gaagaattcatcaaagggattgctgacattgatggtgttggagctgacaaacggagacaa
cctgcgcttctcaggctagctcttgatgatgtgcttgattcactgaagcccaaggagagc
ttggtgatcaggcagaggtacgggcttgatggcaaaggcaacaggacactgggggagatt
gctggaaacttgaatatctcaagagagatggttcgaaagcacgaagtgaaagccctgatg
aagctcaagcatccagctcgagttgattatcttcgcagatacatcgactaa
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