Magnolia sinica: 131242049
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Entry
131242049 CDS
T09699
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msin03041
]
131242049
Spliceosome [BR:
msin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
131242049
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF4523
Motif
Other DBs
NCBI-GeneID:
131242049
NCBI-ProteinID:
XP_058096393
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All DBs
Position
4:569223..587305
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AA seq
482 aa
AA seq
DB search
MSSSSSQPQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANRNQAFV
EFVDLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEIVNNKSTGDVAGNVLLVTIEGV
EAGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFSDSVTASAARDALDGRSIPRYL
LPEHVSTCHLRISFSAHTDLNIKFQSHRSRDYTNPYLPVNPSAIEGTVQPTLGPDGKKKE
PESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGMQALIQYPDITTAAVAK
EALEGHCIYDGGYCKLHLSYSRHTDLNVKAHTDRSRDYTIPDSGLLAMTQAPGLPTTATS
WQSPQAVTSAPMFGGTGAPAQLHNGQMPAWDSSMQAGRPSFVSVPSSFPGQTYGPSSAPY
STPGVLPGPSAESLAGYAKSSGFQQHEQPSGMGAQRMPQYGLEPNARPGGTPPSGQPPLH
YA
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcttcttcgagccagccccagttccgttacacgcagaccccatcgaaggtgctg
caccttcgcaatcttccatgggagtgcactgaagaggagctcgtcgagctctgcaagcct
ttcggcaagatcgtcaacaccaaatgcaacgttggtgccaaccgcaatcaggctttcgtt
gaattcgtggaccttaatcaggctatttctatggtttcatattacgcctcttcatcagaa
cctgcacaggtccgtggtaaaaccgtatacattcaatattctaatagacaagaaattgtg
aacaataaaagcaccggtgatgttgctgggaatgtcttgcttgtgaccattgaaggtgtt
gaggccggcgatgtcagcatagatgttattcacttggtgttctccgcctttgggttcgta
cacaaaattgctacctttgagaaagctgctggttttcaggcattaatccagttcagtgat
tcggtgactgcctcggcagcacgagatgcattggatggaagaagtattcctaggtacttg
cttccagagcatgttagcacatgccacttacgtatttcgttctctgcgcacactgatttg
aatatcaagtttcaatcacatcgtagcagggattacacaaatccttaccttcccgtgaat
ccttctgcaattgaaggaactgtgcagcctactttaggccctgatggaaagaaaaaggaa
cctgagagtaatgtgcttcttgcttccattgagaatatgcaatatgctgtgacggtggat
gttcttcatacggttttctcagcatttggcactgtacagaagattgctatctttgagaaa
aatgggggcatgcaggcactaattcagtatcccgatatcacaactgctgcagttgctaaa
gaagcattagagggacactgcatctatgatggtggctattgtaagcttcatctgtcatac
tctcgtcatactgatctcaatgtaaaggcccatactgacagaagcagagactacacaatc
cctgattcgggtttactggcaatgacacaagctcctggcctgccaactactgccactagt
tggcaaagtcctcaggcagttacttcagctccaatgtttggtggaactggtgcacctgca
caacttcacaatgggcaaatgccagcatgggattcaagcatgcaagcaggacgccctagt
tttgtctcagtaccaagttcatttcctggccaaacatatggaccttcctctgctccatat
tctactccaggagttctccctggcccgtcggctgaatctcttgcaggatatgcaaaatca
agcggttttcagcaacacgagcaaccctctggcatgggcgctcagcggatgcctcagtat
ggtcttgaaccaaatgcacgacctggtggtactccaccctcaggtcagcctcctctgcat
tatgcttag
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