KEGG   Magnolia sinica: 131242154
Entry
131242154         CDS       T09699                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
msin  Magnolia sinica
Pathway
msin03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:msin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    131242154
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msin03021]
    131242154
Enzymes [BR:msin01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     131242154
Transcription machinery [BR:msin03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     131242154
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 131242154
NCBI-ProteinID: XP_058096587
LinkDB
Position
4:complement(2901350..2920503)
AA seq 1215 aa
MEDSKNISSSDEEVEEEGLEDVPMPANGKVPPSSEPLDLDISIDDYMDDGSDNIAASSSG
SLDLSEEFLTKFCKDAARSFFDEWGLISHQINSYNEFTENGIQKIFDSIGEIVVEPGYDP
SKKTDGGWRHASVTFGKVTLEEPKFWTGEKAQDELKVMPRHARLQNMTYSSRMKVEVKLQ
VYIQEPLNSDKCKTGKEKYICKKVLSEETKDIVIGRMPVMVKSKLCWLDRLEKSDCPFDH
GGYFLIKGMEKTFIAQEERCLTRLWISNKPSWAVQYMSLFKRKRLFVKLTETPKADGLNG
GKVITVYFLYQSVPIWIMFFALGASSDKEIFQMIDLDISDSGLVNILLSTVNEADEICEA
FRKQGKALEYIDKQVKSSKFPPEESIEECINKYLFPDLNGHRQKALFLGYMVKCLLLSYS
GRRKCDNRDDFRNKRLDLAGELLARELRVHIKHAERRMVKTMQRDLYGDRSVQFIERYLD
ASIITNGLSRAFSTGSWSHPFKRNERCPGIVATLRRTNPLQMMCDLRKTRQRVTYTGITG
DARFPNPSYWGKVCFLSTPDGENCGLVKNLAVTGLVSTNLVEVPLDKLVRCGMERLNEDT
LLLNRKDKVFLNGNWVGVCRDSSLFVKKLRNVRRNKQIDSKVEIKRDQLQGEVRIFSDAG
RILRPLLIVENLKNIKYFKGGPYSFQYLLDEKVVELIGVEEEEDCLTAWGIKYLFMGDKG
HSSPKYSHCELDLSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGFCTLNPDIRVDT
LSHQLYYPQRPLFRTMVADSLGKPETPGKKDILPMPEYFNGQNAIVAVNVHQGYNQEDSL
VMNRASLERGMFRTEHHRSYKAEVENKEVLETKRLKPKDRVDFCKIQSKIGRVDSLDDDG
FPYIGANLQSGDIVIGKGAESGADHSIKLKHTERGKVQRVVLSANDDGKNFAVVSLRQVR
SPCLGDKFSSMHGQKGVVGFLESQENFPFTIQGIVPDIVINPHAFPTRQTPGQLLEAALG
KGIACGGSMRYATPFTTASVDVITDQLHRAGFSRWGSERVYNGRTGEMLSSLIFIGPTFY
QRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLYERLF
MLSDFSQMFICQKCTRAANVIQRTVPGGKKIRGPFCRFCDSAENIVKVNVPYGAKLLYQE
LFSMGICLKFDTEVC
NT seq 3648 nt   +upstreamnt  +downstreamnt
atggaagattctaagaatataagcagcagcgacgaagaagttgaagaggaaggacttgaa
gacgttccgatgcccgccaatggaaaagtcccgccctcatccgagccgttggatcttgac
atatccatcgacgattacatggacgatggcagtgacaatatcgctgccagcagcagcggg
tccttggatttgagcgaggagttcttgaccaagttctgcaaagatgcagcccggtctttc
ttcgatgagtggggcttgatcagccatcagattaactcatacaacgaatttacagagaac
gggattcaaaagatctttgactcaattggcgagattgtggtggaacccgggtatgatcca
tcgaagaaaacggatggtgggtggaggcatgcatcggtgacgttcgggaaggtaactttg
gaggagccaaagttttggactggggagaaggcccaggacgagctgaaggtgatgccaagg
catgcacggcttcagaacatgacctactcatctaggatgaaagtcgaagtcaagttgcag
gtttatattcaagagcctctcaatagtgataaatgcaaaactgggaaagaaaagtatatt
tgtaagaaggtgctgagtgaagaaacaaaggacattgttattggcaggatgcctgtgatg
gttaaatctaagctttgctggctggataggcttgagaagagtgattgcccttttgatcat
ggagggtattttttgattaagggcatggaaaagacctttattgcacaggaggaaagatgc
ctaacaagactttggatttctaataaaccaagttgggctgttcaatacatgtcattgttc
aagaggaaaagactttttgttaagctcacggaaaccccaaaagctgatggtcttaatgga
ggaaaagtcatcactgtgtatttcttataccagtcagttcctatctggattatgtttttt
gcacttggtgcatcatcggataaagaaattttccagatgattgatcttgacattagtgac
tctggcttggtgaatatacttctgtcaacagttaatgaagctgatgagatatgcgaagct
tttcgcaaacaaggaaaagctcttgaatatattgataaacaagtgaaaagttcaaaattt
ccacctgaggagtcgatagaagaatgcattaacaagtacttgtttcccgatcttaatggt
cacaggcagaaggctctttttcttggatacatggtgaagtgtcttttgctgtcatattct
gggagacgaaagtgtgataacagagatgatttcagaaacaaaaggttggatttagctggt
gagttgcttgcacgagagttgcgagtgcacatcaaacatgctgagaggcgcatggtcaaa
accatgcagagagatctatatggtgaccgtagtgtgcagttcatcgaacgctatctcgat
gcatctatcatcacgaatggtctttctagggccttttcaactggatcatggtctcatcct
ttcaaacggaatgaaaggtgtcctggaattgtggcgactttgaggaggacaaaccccctc
caaatgatgtgcgacttgaggaagacacgtcagcgggtcacatatactggaattactgga
gatgccagatttccgaacccttcctactggggaaaggtgtgctttctttctaccccagat
ggcgaaaattgtggacttgtaaaaaatttggcagtcaccggtcttgtgagcacgaatttg
gtggaagttcctctggataagttggtacgctgtggaatggaacgtctgaatgaggatact
ctgttgttgaatcggaaggataaagttttcttgaatggaaattgggttggagtttgtaga
gattccagtttatttgttaagaaactcagaaatgtgcgccgtaacaagcagattgattcc
aaggtggaaatcaaaagggaccagcttcagggtgaagtccgtatattttctgatgccgga
agaatcttgaggccactcttgattgttgagaatttaaagaacatcaaatatttcaaagga
ggaccttactccttccagtatcttttggatgagaaggttgtagaacttataggtgttgaa
gaagaagaggattgtttaacagcatggggcatcaaatacctcttcatgggtgataaaggt
cactcatccccaaaatacagccactgtgaacttgacctctcatttttattgggtttaagc
tgtggtatcataccatttgcgaaccataattttgccaggagggtgctttaccaatctgag
aagcattctcagcaggctatcgggttctgcactctaaacccagatatcagagtggacact
ctctctcatcaactttattaccctcagaggccactctttaggaccatggtagctgattcc
cttggaaaaccagaaacaccaggcaagaaggatattttacccatgcctgaatattttaat
gggcaaaatgctattgtggcagtaaatgttcatcaagggtacaaccaagaggattctttg
gtcatgaaccgtgcctcactagagcgtggaatgtttcgaacggaacatcataggagttat
aaagcagaggtcgagaacaaagaggttttggagaccaaacgtttaaaaccgaaggacagg
gtggatttttgtaaaatacaaagtaaaatagggcgtgttgacagtctcgatgatgatggg
ttcccatatattggtgcaaatctgcaaagtggtgatattgtcatcgggaagggtgccgaa
tctggagcagatcatagtatcaagctgaaacacacggaaagaggcaaggtacaaagagtt
gtactatctgcaaatgacgatgggaagaactttgcagtagtctctttgagacaggttcgc
tctccttgtcttggggacaagttctcgagcatgcatggtcaaaaaggagtagttggtttc
ctggagtctcaagagaatttccctttcacaattcaaggaattgttcctgatattgttata
aatccacatgcttttccaacccgacaaactcctgggcagctgcttgaggctgctttgggt
aagggaattgcctgcggtggttcgatgagatacgccacccctttcaccactgcctctgtt
gatgtcataactgaccagctgcacagggccggattttcaagatggggaagtgagagagtt
tacaatggccggactggtgaaatgttaagttctttgatctttattggcccaacattttat
cagcggctgattcatatggccgaggacaaggtgaagttcaggaacactggaccagttcac
cctctaactcggcagccagtggccgatcgaaagaggtttggcggtgtcaagtttggtgag
atggaacgcgattgtcttctcgcccatggtgcggctgccaacctttatgagaggctcttc
atgcttagtgacttctcacagatgttcatctgccagaaatgtacccgggccgcaaatgta
atacaaaggactgtgcctggtggaaagaaaatccgtggtccattctgccgtttctgtgat
tctgcggaaaacattgtgaaggtgaatgtgccgtatggtgcaaaattactctaccaggag
ctttttagcatgggtatatgtctaaaatttgacactgaggtttgttga

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