Magnolia sinica: 131242474
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Entry
131242474 CDS
T09699
Name
(RefSeq) protein CHROMATIN REMODELING 25
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
msin
Magnolia sinica
Pathway
msin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131242474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msin03400
]
131242474
DNA repair and recombination proteins [BR:
msin03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
131242474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SLFN-g3_helicase
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
131242474
NCBI-ProteinID:
XP_058097109
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All DBs
Position
4:complement(12830576..12861782)
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AA seq
940 aa
AA seq
DB search
MEEEDDFLSSDSHCSGSDDDEYEEGDGESQQDQEESSADSPPSDEDRKSQNVAALVRGNL
VVKRQPLLPRVLSVSEGAAVARKPFKPPCSNGYRDQNGELVRRLWARKKFVPWGSSRPAL
VAINNRFSITTVIEKDGLEESEPLPPGVEPLVLWQAEESEEGGGGLAQIVVDPLLVRFLR
PHQREGVQFMFECVSGLSSSAGIAGCILADDMGLGKTLQSITLLYTLLHQGFDGKPMVKR
AMIVTPTSLVSNWESEINKWVGGRVQLISLCESTRADVVSGVDSFLTPCSPYQVLIISYE
TFRMHSAKFEKSGCCDLLICDEAHRLKNDQTLTNRALAALPCCRRILLSGTPMQNDLEEF
FAMVNFTNPGVLGDAAYFRRYYETPIICGREPTATAEERALGLERSAELSAKVNQFILRR
TNALLSNHLPPKIVEVVCCKLTPLQSELYYHFIHSKNVKRAIVEEMKRSKILAYITALKK
LCNHPKLIYDTIRSGGSGTSGFEDCIRFFPPELFSGRSGSWSGGDGIWVEMSGKMHVLAR
LLAHLRQKTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSIGKRQKLVNSFNDPS
KDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLS
TGTIEEKVYQRQMSKEGLQKVIQQDQTDSMTPQGNFLSTEDLRDLFTFHADVRSEIHENM
NCIRCKTDDLSVDDSSEDVTDVVKGRDSTNGKCQAEEGSDIGGFAEIAGCLHKLQSSEKQ
LGTPLEEDLGSWGHHTFPTSVPDVILQASAGDEVTFVFTNQVDGKLIPIESMRSLKAKDL
SGPEDSLQAKRAHNQTHMRQSLRHLEMHSPTQTIPVLPSNEDSSRSLFPTQCKSLESGMV
GLQRTSKGLRAPRKPRISHESKLPLKRASDDFDKHEDDFV
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaagacgatttcctttcttccgattctcattgcagtggctctgatgacgat
gaatacgaagaaggtgatggagaatctcaacaagaccaggaggaatcatctgctgattct
ccaccgtccgatgaagacaggaaatcgcagaacgttgctgctctcgtaagggggaacctt
gtcgtgaaaaggcaaccgttacttcctcgagtactctcagtgtcagaaggtgcggcggtt
gctcgaaaaccattcaaacctccatgttcaaatgggtacagagatcagaacggagagctt
gtccgacgcctttgggcacgtaagaagtttgtgccctggggctcttcaaggccagcattg
gttgcaattaacaaccgttttagtattaccactgttattgaaaaagatggattggaggag
agtgagcctctgccccctggggttgagccactggttttgtggcaggctgaggaatctgaa
gagggtggtgggggtttggctcagatagtggtagatccgttgctcgtacgttttcttcgt
cctcatcaaagagaaggggtgcagtttatgttcgaatgcgtttctggcctatccagttct
gctggaattgcaggatgcattctagcggatgatatgggtctcggaaagacattacagtca
atcacactgctgtatactcttcttcaccagggatttgatggaaaaccgatggttaaaagg
gcaatgattgttacccccacaagccttgtcagcaattgggagtctgagattaataaatgg
gttggggggagagttcagcttatttctctatgtgaaagcacccgagctgatgttgtttcg
ggtgttgatagtttcctaacaccttgcagcccttatcaggtattaattatatcttacgag
acatttcgaatgcattcagcaaagttcgagaaaagtggatgctgtgaccttctcatatgt
gatgaggctcataggctaaaaaatgaccagacattgacaaatcgggcactggctgctctt
ccgtgctgccgtcgcattttattgtcaggaaccccgatgcagaatgatttggaggagttt
tttgccatggttaactttaccaatcctggagtattgggagatgcagcatattttcgtcgt
tattacgaaacaccaatcatatgtggaagagagcctactgcaactgcagaagaaagagca
ttgggtcttgagcgctctgctgagcttagtgcgaaagtaaaccagttcatattgaggagg
acaaatgctttgttatcaaatcatttaccaccaaagatagtggaagttgtctgttgcaag
ttgactcctctccagtcggaattgtattaccattttatacactcaaaaaatgttaaacga
gcaattgtggaggagatgaagcggtcaaaaattttggcatatattacggctcttaaaaag
ctctgcaaccatccaaaactcatttacgatacaatccgcagtgggggttcagggacatcg
ggttttgaggactgcatacgcttcttcccaccggaactcttctctggaagatcaggatca
tggtctgggggtgatggtatttgggtagaaatgtctgggaaaatgcacgtcttagctcga
ttattggcccatctgcgtcagaaaacagatgatcgaattgttcttgtttccaactatacg
cagactctggatctctttgctcaactatgtcgtgagagaagatatccatacttgaggctt
gatggaaccacatcgattggcaaaagacaaaaactggtcaacagctttaatgatccttct
aaggacgagtttgtgtttctcttaagcagcaaggctggtggttgcgggcttaatttgata
ggtggaaatcgacttgtcctgtttgatcctgattggaaccctgctaatgacaagcaggcg
gctgcaagagtctggagagatgggcagaagaagagggtgtacatatacagatttttaagc
actggaacaattgaagaaaaggtctaccagcgtcagatgtcaaaagaaggacttcagaaa
gttattcagcaagaccaaacagatagcatgacgccacagggaaactttctatcgacggaa
gacctacgtgatcttttcacatttcatgcagatgtcaggtctgaaatccatgaaaacatg
aactgtattcgttgtaagacagatgatttaagtgtagatgacagctcagaggatgtgact
gacgttgtaaaagggagggattctacaaatggaaagtgccaagctgaagagggttctgat
ataggtggatttgcagagattgctggatgcttgcataagttgcaaagctcagagaaacag
ctgggaactcctcttgaggaggatttaggaagttggggtcatcatacttttccaacatct
gtgcctgatgtaattcttcaagcgtcagctggtgatgaggttacatttgtttttacaaac
caagtagatgggaagcttattcccattgaatcgatgagaagtttgaaggcaaaggatttg
tcaggaccagaagacagcctccaagcaaagagagctcacaaccaaacacacatgcgacaa
tccctaagacatcttgaaatgcattctcccacccaaacaatcccagtactcccttccaat
gaagattctagtagaagtttgttccctactcaatgcaaatctttggagtctggtatggtc
ggattacaaaggacatcaaaagggttgcgtgcgccaagaaagcctcgcatttcccatgag
agtaaattgcccctgaagagagcatctgatgattttgataaacatgaagatgattttgtt
tga
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