Magnolia sinica: 131242564
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Entry
131242564 CDS
T09699
Name
(RefSeq) cullin-4-like
KO
K10609
cullin 4
Organism
msin
Magnolia sinica
Pathway
msin03420
Nucleotide excision repair
msin04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131242564
09124 Replication and repair
03420 Nucleotide excision repair
131242564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msin04121
]
131242564
03400 DNA repair and recombination proteins [BR:
msin03400
]
131242564
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msin04147
]
131242564
Ubiquitin system [BR:
msin04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
131242564
DNA repair and recombination proteins [BR:
msin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
131242564
TCR (transcription coupled repair) factors
Cul4-CSA complex
131242564
Exosome [BR:
msin04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
131242564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
131242564
NCBI-ProteinID:
XP_058097269
LinkDB
All DBs
Position
1:complement(20394051..20455202)
Genome browser
AA seq
818 aa
AA seq
DB search
MSHPKRSTCNNSSSSSSPFSVMKKAKSQPLAFSTESKNGLQRISNDDDNAQPMLVDDDLK
AEAADASSIAFGIVGCSRNPTTGVAANLSRKKATPPQPAKKLVIKLTKDKPKLPTNFEED
TWTTLKSAINAIFLKQPDPCDSEKLYQAVSDLCLHKMGGNLYKRIQQECEAYISATLQAL
VGQSPDLVVFLSLVEKCWQDLCDQMLMIRGIALYLDRTYVKQTPNVRSLWDMGLQLFCKH
LSLSPEVEHKTVTGLLRLIERERLGEAIDRTLVNHLLKMFTALGTYTESFEKPFLECTSE
FYAAEGVKYMQQSDVPDYLKHAELRLHEEHERCLLYLDPSTRKPLVATAERQLLDRHISA
ILDKGFTLLMDANRIEDLQRMYVLFSRVNALESLRQALSSYIRGTGQGIVMDEEKDRDLV
SCLLEFKASLDTIWEESFSRNEAFSNTIKDAFEHLINLRQNRPAELIAKFLDEKLRAGNK
GTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTE
CGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDV
RLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLML
FNDAQKLSFQDIKDSTGIEDKELRRTLQSLACGKVRVLQKFPKGREVEDEDSFVFNEEFS
APLYRIKVNAIQMKETVEENASTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQ
QLKFPIKPADLKKRIESLIDREYLERDKSNPQIYNYLA
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacccaaagcgctcgacctgtaacaacagcagcagcagcagtagccctttctct
gtcatgaagaaagccaaatcccagccccttgcattctccacggaatccaagaacggcctt
cagcgcatcagcaacgatgacgacaacgcccaacccatgcttgttgacgacgatctcaag
gccgaggccgcggacgcatcctccatcgccttcggcatcgttggctgcagcagaaacccc
accaccggcgttgccgccaatctctcgaggaagaaggctacccctccccagcccgcgaag
aaactcgtcatcaagctcaccaaagataaacccaagctgccaacaaattttgaagaagat
acatggacaaccttgaagtcggctattaatgctatattcttgaagcaaccagatccttgt
gactctgagaagctttatcaggctgttagtgacctttgtctgcacaagatgggtggaaat
ctttataaacgaattcagcaggaatgtgaagcatacatatctgcaactctacaggcatta
gttggccaaagcccagatttagtggttttcttatcactggtggagaaatgctggcaggat
ctttgtgaccagatgttgatgattcgtggtatagctttatatcttgacagaacgtatgtc
aagcaaaccccaaatgttaggtcgttgtgggacatggggttgcagctattctgcaaacat
ctctctttatctccagaagttgaacacaagactgtcaccggccttttaagattgatcgag
agggagagattaggtgaagctatcgataggactctggttaaccatctcctgaagatgttt
actgctctaggaacctacacagaaagctttgagaagccttttcttgagtgcacatctgaa
ttttatgctgctgagggtgtgaagtacatgcagcaatcagatgttcctgattatttgaaa
catgctgagttaaggttgcatgaagaacatgaaagatgcttactctacctggatccaagt
acgcggaagcccctggtggcaactgcagagaggcaacttcttgaccgccatatatctgcc
atacttgataaggggttcacattgcttatggatgcaaatcgcattgaggaccttcagaga
atgtatgttctgttttcaagagttaatgctctcgaatcactacgtcaggcccttagctca
tacattcgagggactgggcagggtattgtcatggatgaagagaaagacagagatttggtt
tcctgtctcttggagtttaaggcctctcttgacacaatctgggaagaaagcttcagcaga
aacgaagcattttccaacaccataaaagatgcatttgagcatctcattaatcttcgtcag
aaccgacctgctgagctgatcgctaagtttctagatgagaagcttcgtgctggtaacaag
ggtacttctgaagaggagttggagggtacactggataaagttttggtcttatttagattt
atccaaggtaaagatgtgtttgaagcattctacaagaaggatcttgctaagaggttgctg
ctgggaaagagtgcatctattgatgctgagaagtcgatgatttctaagctcaagactgaa
tgcgggagccagtttacaaataagctcgaaggaatgttcaaggacattgaattgtctaaa
gagattaacgagtccttcaaacagtcatcccaagcaaggacgaaactcccatcgggaatt
gagatgagcgtccatgtcctaacaactgggtactggcctacatatccacccatggatgtt
cggctgcctcatgaactgaacgtttatcaggacattttcaaagagttctatttgagcaag
tatagtgggaggcgtttgatgtggcaaaattcgttaggtcactgtgtattgaaagccgag
ttcccaaaaggtaaaaaggagttggcagtgtcgctgttccagactgttgttttgatgctg
tttaatgatgcccaaaagcttagttttcaagatatcaaggactctactggcatcgaggat
aaggagctgaggaggactttgcagtcgcttgcgtgtggcaaagttcgtgtacttcaaaag
ttccctaaagggagagaagtggaggatgaggactcatttgtgttcaatgaagaattcagt
gctccactctaccgcataaaggtaaatgccatccagatgaaggagacagtcgaagagaat
gcaagcaccacggaacgagttttccaggatcggcagtatcaggttgatgctgcaattgtt
cgcataatgaagactaggaaagtactgagtcatacactcttgataactgagctttttcaa
cagctcaagtttccaataaagccagcggatttgaagaaaaggatcgaaagcctcatagac
agggagtacctggagcgggacaagagcaatccacagatatacaactacctggcttaa
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integrated database retrieval system
