Magnolia sinica: 131242631
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Entry
131242631 CDS
T09699
Name
(RefSeq) F-box protein SKP2A-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
msin
Magnolia sinica
Pathway
msin04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131242631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msin04121
]
131242631
Ubiquitin system [BR:
msin04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
131242631
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GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
131242631
NCBI-ProteinID:
XP_058097373
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Position
4:complement(17558842..17570334)
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AA seq
366 aa
AA seq
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MVRGKLVTEDLDICFQKLIVGGKMGGGAMTDWKDIPMELLLRIVSLVDDRTVIMASGVCT
GWRDAICLGLAHLSLSWCKYNMNNLVLALAPKFTKLQVLTLRQNVPQLEDNAVETLASYC
HDLRDLDLSKSLKLTDRSLYALARGCPCLTKLNISGCSAFSDTALEHLTSVCRKLKNLNL
CGCTRAASDIALQAIADNCSQLQSLNLGWCEGVSDLGVMSLAMGCPDLRSLDLCGCVLIT
DESVIALANRCHHLRSLGLYYCQNITDRAMYSLANSRVKDKHDDLWESVLSSYSTEEGLM
NLNISQCTALTPPAVQAVCNSFPALHTCPERHSLIISGCLNLTSVHCACAVQAHRAGRRA
IPHHAH
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggtcagaggaaaactggtaacagaggatttggacatctgttttcagaaactcattgtc
ggagggaagatgggagggggagcgatgactgattggaaggacattccaatggagcttctc
ttgcgcattgtttccctggtcgatgatcggacagtcatcatggcttctggtgtgtgtacg
ggatggagggatgcaatttgcttggggctggctcatctctctctgtcttggtgcaagtac
aacatgaacaaccttgtattagcacttgcccccaagttcacaaagttgcaggttctaaca
ttacgccaaaatgtgccacaacttgaggacaatgctgttgagacccttgcaagttactgc
catgatctgcgtgacttggacctaagcaaaagcctcaagctgactgatcgttccttgtat
gccttagcccgtggctgtccctgccttactaaactaaacatcagcgggtgctcagccttc
agtgatactgcccttgaacatctgaccagtgtgtgcaggaagttgaaaaacttgaatctt
tgtggatgcaccagagctgcatccgacatagctttgcaggctattgcagataactgcagt
cagttgcagtccttgaatctgggttggtgtgagggggtcagtgacttaggtgtgatgagc
ttggcgatggggtgtccagatctaaggtctctggacctttgtggttgtgttcttattaca
gacgagagtgtgattgctttggcaaacaggtgccatcatctcagatccctcggtttatat
tactgccagaacattaccgacagggccatgtattcactggctaacagccgggtgaaggac
aagcatgacgacctgtgggagtctgtgttaagcagctacagtactgaggaaggccttatg
aatcttaacatcagccagtgcacggccctcaccccgccagctgttcaggctgtttgcaac
tcgttcccggcgctccacacctgtcctgagaggcattccctcatcatcagcggttgtctc
aacctcacatctgtgcactgtgcatgcgccgtccaggctcaccgtgcagggaggagggca
atccctcatcatgcacactga
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