Magnolia sinica: 131242654
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Entry
131242654 CDS
T09699
Name
(RefSeq) cullin-4-like
KO
K10609
cullin 4
Organism
msin
Magnolia sinica
Pathway
msin03420
Nucleotide excision repair
msin04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131242654
09124 Replication and repair
03420 Nucleotide excision repair
131242654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msin04121
]
131242654
03400 DNA repair and recombination proteins [BR:
msin03400
]
131242654
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msin04147
]
131242654
Ubiquitin system [BR:
msin04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
131242654
DNA repair and recombination proteins [BR:
msin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
131242654
TCR (transcription coupled repair) factors
Cul4-CSA complex
131242654
Exosome [BR:
msin04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
131242654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
DUF1779
Tuberculin
Motif
Other DBs
NCBI-GeneID:
131242654
NCBI-ProteinID:
XP_058097415
LinkDB
All DBs
Position
1:complement(20940573..20985287)
Genome browser
AA seq
816 aa
AA seq
DB search
MSHPKRPACNSSSSSPFSAVKKAKSQPLAFSLESKNVLHHLSSDVGNSDSMLLDDDPKAE
GADMSSIALGVVGCSRNPTTGIAANLSRKKAIPPQPAKKLVIKLTKDKPKLPTNFEEDTW
GTLKSAINAIFLKQPDPCDSEKLYQAVSDLCLHKMGGNLYQRIQKECEAHISATLQSLVG
QSPDLVVFLSLVEKCWQDLCDQMLMIRGIALYLDRTYVKQTANVRSLWDMGLQLFRKHLS
LSPEVEHKTVTGLLRLIERERLGEAIDRTLVNHLLKMFTALGIYTESFEKPFLECTSEFY
AAEGVKYMQQSDVPDYLKHAEIRLHEEHERCLLYLDSSTRKPLVATAERQLLDRHISAIL
DKGFTLLMDANRIEDLQRMYVLFSRVNALESLRQAISSYIRGTGQGIIMDEEKDKDLVSC
LLEFKASLDTIWEESFTRNEAFSNSIKDSFEHLINLRQNRPAELIAKFLDEKLRAGNKGT
SEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECG
SQFTNKLEGMFKDIELSKEINESFRQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRL
PHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFN
DTQKLSFQDIKDSTSIEDKELRRTLQSLACGKVRVLQKFPKGRDVEDEDAFVFNEEFSAP
LYRIKVNAIQMKETVEENASTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQL
KFPIKPADLKKRIESLIDREYLERDKSNPQIYNYLA
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacccaaagcgcccggcctgtaatagcagcagcagcagccctttctccgccgtg
aaaaaagccaaatcccagccccttgcattctccctggaatccaagaacgtcctccaccac
ctcagcagcgacgtcggcaactccgactccatgctcctcgacgacgatcccaaggccgag
ggcgcggacatgtcctccatcgccctcggcgtcgttggctgcagcaggaatcccaccact
ggtatcgctgccaacctgtcgaggaagaaggccatccctccccagccggcgaagaagctc
gtcatcaagctcaccaaagataaaccaaagctgccaacaaattttgaggaggatacatgg
ggaacattgaagtcagctattaatgctatattcctgaaacagccggatccttgcgactct
gagaagctttatcaggctgttagtgatctttgtttgcacaagatgggtggaaatctttac
caaagaatacagaaggaatgcgaagcacacatttccgcaacactacaatcgttagttggc
caaagcccagatttggtagttttcttatcattggttgagaaatgctggcaggatctttgt
gaccagatgttgatgattcgtggtatagctttatatcttgacagaacatatgtcaagcaa
accgcaaatgttcggtctttatgggacatggggttgcaattattccgcaaacatctctct
ttgtctccagaagttgaacacaagacagtcactggtcttttaagattgatcgagagggag
agattaggtgaagcgattgataggactcttgttaaccatctcttgaagatgtttactgct
ctaggaatctacacagaaagctttgagaagccgtttctggagtgtacatctgagttttat
gctgctgagggtgtgaagtatatgcagcaatcagatgttcctgattacttgaaacatgct
gagataaggttgcatgaagaacatgaaagatgcttactctacctggattcaagtacaagg
aagccactggtggcaactgcagagaggcaacttcttgaccgtcatatatctgccatactt
gataagggattcacattgcttatggatgcgaatcgcattgaggacctacagagaatgtat
gttctgttttcaagggttaacgctcttgaatcactacggcaggccattagctcatacatt
cgtggcactgggcaaggcattatcatggatgaagagaaagacaaagatttggtttcctgt
ctcctagagtttaaggcttctcttgacacaatatgggaagaaagcttcacaagaaatgaa
gcattttcaaacagcataaaggattcatttgaacatctcattaatcttcgtcagaaccga
cctgctgagctgattgcaaagtttctggatgagaagcttcgtgctggtaacaagggtaca
tctgaagaggagttggagggtacacttgataaagttttggtattgttcagatttatacaa
ggtaaagatgtgtttgaagcattttacaagaaggatctggcgaagaggttactgttggga
aagagtgcatctattgatgctgagaagtcgatgatttctaagctcaagacagaatgtggg
agccagtttacaaataagcttgaaggaatgttcaaggatatcgaattatctaaagagata
aatgagtcattcagacagtcgtcccaggccaggacaaaactgccatcagggattgagatg
agcgtccatgtcttgacaacagggtattggccaacatatccacccatggatgttcggctt
cctcatgaactgaacgtttatcaggacattttcaaagagttctatttgagcaagtacagt
gggaggcgcttaatgtggcaaaattcattaggtcactgtgtattaaaagcggagttccca
aaaggtaaaaaggagttagcagtgtcgctgttccagactgttgtcttgatgctgtttaat
gatacccaaaaacttagctttcaagatatcaaggattccaccagcattgaggataaagag
ctaagaaggactttgcagtcactcgcttgcggcaaagttcgtgtacttcaaaagtttcct
aaagggagagacgtggaggatgaggatgcatttgtattcaatgaagaattcagcgctccc
ctctaccgcataaaggtgaatgcgatccagatgaaggagacagttgaagagaatgcaagc
accacggaaagagttttccaggatcgccagtatcaggttgatgctgcaattgttcggata
atgaagactaggaaagtactgagccacacgctcttgataactgagctcttccagcagctc
aagtttccaataaagccagcggatttgaagaaaagaattgagagcctcatagacagggag
tacctggaacgggacaagagcaacccacagatatacaactacctggcttag
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