Magnolia sinica: 131242684
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Entry
131242684 CDS
T09699
Name
(RefSeq) N-glycosylase/DNA lyase OGG1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
msin
Magnolia sinica
Pathway
msin03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
131242684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msin03400
]
131242684
Enzymes [BR:
msin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
131242684
DNA repair and recombination proteins [BR:
msin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
131242684
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
RecR_HhH
HHH
HHH_8
Motif
Other DBs
NCBI-GeneID:
131242684
NCBI-ProteinID:
XP_058097473
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All DBs
Position
4:19635219..19641611
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AA seq
390 aa
AA seq
DB search
MKRQRPKPPLLSSKRPSRPQPSTPPSSIHHLRSLPSSKTKRNLTCQSAQSPPLSWEPLNI
QRSELSLPLTFPTGQTFRWKQTGPSQFTGPIKSHLISLKHIDGHDDSSSGVAFFVHRTPD
HLQAVSALHDYLNLSLSLADIWRKFSESDARFAQLAPHLAGARVLRQDPVECLFQFLCSS
NNNIKRITNMVGVISSLGDYLGSVGGFDFHEFPSLEQLSLVSEEQLRRDGFGYRAKYIVG
TVKALQLKPGGGAEWLASLRDLELREVIDALCTLPGVGPKVAACIALFSLDQHHAIPVDT
HVWQIASRYLMPELAGARLTPKLCSHVAEAFVSKFGKYAGWAQNVLFIGDLPSQKALLPS
DLCSVKETKLASSEYEKQEVAVELVRKLMD
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggcaaagaccaaaacccccattactttcttcaaaaagaccatctcgtcctcaa
ccatcaacacccccatcatccatccatcatctcagatctctcccatcttccaaaaccaaa
agaaatctcacctgccaatccgcgcaatcaccaccattatcatgggaacccctcaacatc
caacggtcagaactctccttacccctcacattccccactggccagaccttccgatggaag
cagactggcccatctcaattcaccggtcccatcaaatcccacctcatctccctcaagcat
atcgacggccacgatgactcctccagtggggtagcctttttcgtccaccgcacccccgat
cacctccaggccgtctctgctctccatgactacctcaacctctctctctccctcgcagac
atctggaggaaattctctgagtccgacgcccgcttcgcgcagctggcacctcacctcgcc
ggggctcgcgtgcttcggcaggacccggtcgagtgcctgtttcagttcctctgttcgtcg
aacaacaacatcaagaggattacgaacatggttggcgtcatttcctccttgggcgattat
ctgggttctgttggagggtttgatttccatgaattcccgtctttggaacagctatcgttg
gtctctgaagagcagcttcggagagatgggttcggttacagggccaaatacatagttggt
acagttaaggctttgcaattgaagcctgggggaggtgccgagtggcttgcttcgcttcgc
gacttggagcttcgtgaagtgattgatgccctctgtactttgcctggagttggtcccaag
gtggcagcctgcatcgctctgttctctcttgaccaacaccatgctattcctgttgatacg
catgtatggcagattgcatctcggtacctcatgccagagcttgcaggtgcgcgtctcaca
cctaagctttgcagtcatgtggcggaggcatttgtgagcaaatttgggaagtatgctggt
tgggcgcagaatgtgcttttcatcggcgacttgccatctcaaaaggcccttctgccatca
gatttgtgctctgtcaaggaaacaaaattggcctctagtgaatatgagaagcaggaagtt
gctgttgaactcgtcaggaagttgatggattga
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