Magnolia sinica: 131242693
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Entry
131242693 CDS
T09699
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
msin
Magnolia sinica
Pathway
msin03030
DNA replication
msin03410
Base excision repair
msin03420
Nucleotide excision repair
msin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
131242693
03410 Base excision repair
131242693
03420 Nucleotide excision repair
131242693
03430 Mismatch repair
131242693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msin03032
]
131242693
03036 Chromosome and associated proteins [BR:
msin03036
]
131242693
03400 DNA repair and recombination proteins [BR:
msin03400
]
131242693
DNA replication proteins [BR:
msin03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
131242693
DNA Replication Termination Factors
ELG1-RFC complex
131242693
Chromosome and associated proteins [BR:
msin03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
131242693
DNA repair and recombination proteins [BR:
msin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
131242693
Check point factors
HRAD17(Rad24)-RFC complex
131242693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
Rad17
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
AAA_16
AAA_11
AAA_assoc_2
AAA_5
AAA_14
DNAX_ATPase_lid
DUF815
AAA_7
AAA_24
RuvB_N
ResIII
AAA_30
ATPase_2
AAA_19
bpMoxR
nSTAND3
AAA_3
SLFN-g3_helicase
AAA_2
TIP49
AAA_28
Mg_chelatase
RNA_helicase
AAA_18
Motif
Other DBs
NCBI-GeneID:
131242693
NCBI-ProteinID:
XP_058097488
LinkDB
All DBs
Position
4:19910192..19920077
Genome browser
AA seq
360 aa
AA seq
DB search
MAETMNSPMEIDEGFLPSKSPTNKGKSVISEVSSKSTPWVEKYRPQSLADVAAHRDIVDT
IDRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGSHYQNMILELNASDDRGIDVVRQQ
IQDFASTQSFSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFSLICNHVNKI
IPALQSRCTRFRFAPLDATHVTERLQYVIKAEGLDVTESGLAALVRLSNGDMRKALNILQ
STQMASPHVTEDAVYLCTGNPMPKDIEQISSWLLNESFATSFGCISNMKMRKGLALVDIV
REVTMFVFKIKMPADVRVKLINDLADIEYRLSSGCNDKLQLGALVTCFTYARASLVAAAK
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggcggagacgatgaactctcccatggaaatcgacgagggttttctgccatcgaagagc
ccaacaaacaagggcaaaagcgtaatttcagaagtaagcagcaagtccacgccgtgggtc
gagaaataccgtccacagtccctcgcagatgtagctgcccatcgcgacatcgtcgatacc
atcgacaggctcacgaacgagaacaagctgccccatctcctcctctacggcccacccggc
accggcaagacttccaccatcctcgccgtcgcccggaagctctatgggtcccactaccag
aacatgatcctcgagctcaatgcatctgacgacaggggcattgacgtcgtccgccagcag
atccaagacttcgccagcacccagagcttctcctttggtgccaagtcctccgtgaagttg
gtcctattggatgaagcagacgccatgacgaaggatgcacagtttgccttgcgtagagta
attgagaaatacacaaagagcaccaggttttctctcatttgtaatcatgtcaacaaaatc
attccagctttacaatcaagatgtactcgttttagatttgctcctctcgatgctactcac
gtcacagaacgccttcaatatgtaataaaggctgaagggcttgatgtaactgagagtggc
ttagcagcacttgtacggctgagcaatggtgacatgagaaaggctttgaatattttgcag
tcaacgcaaatggcttctccgcatgtaactgaagacgccgtttacttgtgcactggaaac
ccaatgcctaaagacattgagcagatatcctcctggcttctaaatgaatcatttgcgact
agtttcggatgcatatctaatatgaagatgaggaaaggattggcattggtggacattgtg
agagaggttaccatgtttgtgtttaagattaaaatgccagcagatgttcgagttaaatta
atcaatgatttggcagacatcgagtacaggttgagttctggatgcaatgacaagctgcag
cttggggcactcgtcacttgtttcacatatgctcgagcttctctggtggctgctgctaag
taa
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