Magnolia sinica: 131242843
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Entry
131242843 CDS
T09699
Name
(RefSeq) uncharacterized protein LOC131242843 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
msin
Magnolia sinica
Pathway
msin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131242843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131242843
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
131242843
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
Zn_ribbon_RanBP
RUBY_RBDX
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
131242843
NCBI-ProteinID:
XP_058097732
LinkDB
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Position
4:25768009..25801838
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AA seq
747 aa
AA seq
DB search
MPRKVYHGVDYDEEYDDYYDDYDYDYDVEVDEGETSQGDKAVAKSGLWRCSICTYDNDES
LSSCDICGVFRDSSVNISNNGAEKKVDGMCKDSGVSVMAKSLFASSPRGTPKMDIIFQQL
SYDFLSKGTNNSHGFGNIRGHFNDFQKAFMAPYCSHSRDIAPFKFDNLSPDDMVSAGKSS
SMKASKAPFKFDNFSPHDMVSAGKNSSTKASKANTLQLPPSKVSSSTSEMKILPNDKMRG
SSSALSTKARQPNQDESTGSAVNEDKPQALMSNLRNLNLDRNTGSSKSSTNTRRPTSHAQ
YKPEKWMLPIQEEKTLTQLSLAIVGHVDSGKSTLSGRLLHLMGRISQKEMHKFEKESKQK
GKGSFAYAWALDASGEERERGITMTVAVAYFDSKKYHVVVLDSPGHKDFVPNMISGATQA
DAAILVIDASIGSFEAGMEGNGGGQTKEHAQLIRSFGVEQIIVAVNKMDVVEYSKERFDN
IKLQLGTFLRLCGFKESLMMWIPLSAMENQNLVAAASDARLSSWYEGPHLLDAIDSLQPP
LRDVSKPLRMPICDVIKSHSLGQVAVNGKLEMGALKNGSKVLVLPSGDSATVRSIERDSG
TCSIARAGDNISVSLQGIDGNCLMTGGVLCHPDFPVAIATCLELKILILDISMPILVGSQ
VEFHVHHAKEAAKVVRILSLLDPKTGKVSKKAPRCLLARQSAVIEVALDRAVCVEEFSNC
KALGRVFLRSSGKTVAVGIINRVIEQN
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcaaagtatatcatggagttgattatgatgaagaatatgatgattactatgat
gattatgactatgattatgatgtagaagtagatgaaggggaaacatctcagggagacaag
gcagttgcgaagtctgggctttggcgctgctccatttgtacatatgataacgatgaaagt
ttgtcttcatgtgatatatgtggagtttttcgggattcttccgtcaacatttccaataat
ggtgctgagaaaaaagttgatggcatgtgcaaagattctggagtatcggttatggccaag
tctctttttgcatcatcgcctcgtggaacgcccaaaatggatataatctttcagcagcta
agttatgattttctcagtaaagggaccaataactcccatgggtttggaaatattcgtgga
cattttaatgatttccagaaagcttttatggctccttactgcagtcactctagagatata
gcccctttcaagtttgataacctctctccagatgatatggtttcagctgggaagagttcc
tctatgaaggcttcaaaagcccctttcaagtttgataacttctctccacatgatatggtt
tcagctgggaagaattcttctacgaaagcttcaaaagccaacactttgcagttgccacct
tcaaaagtgtcttcaagcaccagtgagatgaaaattctcccaaacgataaaatgagaggg
agttcgtcggccttgtcgactaaagctcgtcaacctaatcaagatgagagcaccggttct
gctgtcaatgaggacaagccacaggccctgatgagcaatttacgcaatttgaatttggat
agaaacactggatcttcgaaaagttctacaaatactagaagaccgacgtcacatgcccag
tataagccagaaaaatggatgcttcccattcaggaagaaaaaaccctgactcaactaagt
cttgcaatcgttggccatgttgattctggaaaatcaacactatcggggagactgctacac
cttatgggccggatttctcagaaggaaatgcataaatttgagaaagagtccaaacaaaag
gggaaaggatcatttgcatatgcatgggcactagatgcgagtggtgaagaaagggaaaga
ggtataaccatgacagtggctgtcgcatatttcgactcaaagaaataccatgttgttgtg
ctcgactctccaggacataaagattttgttccgaatatgatatcgggtgctacacaagca
gatgctgctattcttgttatagatgcctctattggttcatttgaagccggtatggaagga
aatggaggagggcaaacaaaggagcatgcacaacttattagaagttttggcgttgaacag
atcattgttgctgttaataaaatggatgttgtggagtactccaaggaaaggtttgataac
ataaaattgcaactcggcacatttctccgtttgtgtgggttcaaggaatcgttgatgatg
tggatccctttgagtgccatggaaaatcagaatttggtggctgctgcatctgatgcccgt
ttatcatcttggtatgaaggaccacatttgttggatgccatcgattcgttgcaacctcct
ttgagggatgtctcaaagccacttcgtatgcccatatgtgatgtcatcaagtcacattcg
ttgggccaggtagcagttaacggtaaactggagatgggagctctaaaaaatggttctaag
gttctagtattgccttcaggagattcagccacagtgcggtccattgaacgggattctggc
acgtgcagcattgcaagagcaggagacaatatatcagtcagtttgcaaggcattgatgga
aattgcctgatgacaggtggagtgctctgtcacccagatttccctgtggcgattgcgaca
tgtttggagctgaagatccttatcttggatatttcaatgccaatcctagttgggtctcag
gtggagtttcacgtgcatcatgcaaaggaggctgcgaaagtggtgaggatattgtctctg
cttgatccaaagacaggcaaggtctctaaaaaggcaccgcgctgtcttctagcaagacag
agtgcagtaatagaggtggctctggatagggcagtttgtgttgaagaattctctaattgt
aaggctcttgggagggttttcttgcgatcgtcgggaaagactgttgcagtagggatcata
aacagagtaatcgaacagaactag
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