Magnolia sinica: 131242851
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Entry
131242851 CDS
T09699
Name
(RefSeq) E3 ubiquitin-protein ligase HAKAI homolog
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131242851
04131 Membrane trafficking [BR:
msin04131
]
131242851
04121 Ubiquitin system [BR:
msin04121
]
131242851
Enzymes [BR:
msin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131242851
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
131242851
Membrane trafficking [BR:
msin04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
131242851
Ubiquitin system [BR:
msin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131242851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
Prok-RING_4
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
131242851
NCBI-ProteinID:
XP_058097750
LinkDB
All DBs
Position
4:complement(26109269..26117117)
Genome browser
AA seq
518 aa
AA seq
DB search
MLQIRLSKIPSSEGGGGGAKPLPVETVTVACPDHLVLADLLVAKGLGTTSASSVVKTVGR
RSRRHLGERVHFCVRCDFPIAIYGRLSPCEHAFCLECARSDSSCYLCDERIQKIQTIKML
EGIFICAAPHCLKSFLKRSDFEAHIHETHADLLQPSAEKEEGNEAEAMNISRPPSADPHI
KQAALPDSSTARSQPRPNFSPNSNSQSHDREDKARRHQQPREQLPPKPLLQLKPPPFYSR
NPHQLTEPQPDSNPHQGFDRPYNRFHHPQNFDSQGGPPLYRRDSDQFLPDKQPGILSEPP
FADYPQPLNPLQPLSFQGPPNANQEPSPLPQFNYPPFPAEGGQPFYSNNYELARPELPSE
GGGSEQGSLLGFPPAAPAGVGGFSDGYPRPWNMGLPGIPFEPMPVAAGQGIPEGFANPPD
SQWRMPFFQGDYGRIPGGLPMNSPPLGKEGSEQQGSAADQKDGKGVLAPVPLPPPPPLPP
PPLSQLKRAKFSSSGDMGREGQGYGWQNEKRGFGSGQD
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagatccgtttgagcaagattccgtcctcggaaggtggcggcggaggggcgaaa
ccgttgccggtggagacggtgaccgttgcctgcccagatcacctcgtcctagccgacctc
ctagtcgccaagggcctagggaccacatctgcttcctccgtcgtcaagaccgttggccgt
aggtcccgccgccacctcggcgagagggtccacttctgtgtccgctgcgatttccccatc
gccatctacggtcgcctgagcccttgcgagcatgctttctgtttagaatgtgcaagaagc
gattcgagctgctatctttgcgatgagcgtattcagaagattcagaccattaaaatgctg
gaagggattttcatctgcgcggcccctcactgtctcaaatccttcctcaagaggtccgac
ttcgaagctcatatccacgaaacccatgctgacctcctacaacccagtgcagagaaggaa
gaaggcaacgaagcagaagcaatgaacatctcaaggcccccttctgcagacccacatatc
aagcaagctgcgctgccagattcttctactgcccgctcccagccgaggcccaatttttca
cccaattcaaactctcagtcccacgaccgcgaagataaagctcgtcgtcaccagcagccc
agagaacagctgcccccaaagccgttgctacagctgaagcccccacctttctacagccga
aacccacatcagctgaccgagccacagcctgacagcaacccacaccagggcttcgacagg
ccctacaataggttccatcacccacagaactttgacagccagggtggccccccactttat
cggcgagactctgaccagtttctcccagacaaacagccaggtattctatctgaaccgcca
tttgcagactacccacaacctttgaatccccttcagcccctgagttttcagggtccacca
aatgcaaaccaggagccaagtcccctgccacagttcaactatcctccttttccagcggag
ggaggtcaacccttctacagcaataactatgagctggccaggccagaattgccatcagag
ggtgggggatcagaacaggggtccttgctgggtttcccacctgctgccccagcaggggtt
gggggtttctcggacggttatccccgaccatggaacatgggactcccaggtataccgttt
gaaccaatgcctgtggcggcaggccagggaattcctgaagggtttgcaaacccacctgat
tctcagtggagaatgccgtttttccaaggtgattatggcaggataccaggaggtttgccg
atgaattctcctcctcttggtaaggagggatctgaacagcagggcagcgctgcagaccag
aaggatggcaagggcgtgttagcaccagttccacttccacctccacctccgctgccgcct
ccaccactatcacagctcaaacgggcgaagttttccagctctggagatatgggtagagag
ggtcagggctatgggtggcaaaatgaaaagcgtggttttggaagtggccaggattaa
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