Magnolia sinica: 131242905
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Entry
131242905 CDS
T09699
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msin04131
]
131242905
04121 Ubiquitin system [BR:
msin04121
]
131242905
Enzymes [BR:
msin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131242905
Membrane trafficking [BR:
msin04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
131242905
Ubiquitin system [BR:
msin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131242905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
zf-C2H2_DHX34
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
131242905
NCBI-ProteinID:
XP_058097871
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All DBs
Position
4:28534545..28567356
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AA seq
353 aa
AA seq
DB search
MSSGPPPAAVPTGPQPYFCHHCNRPVSITPLPSSDLVCPICNGGFLEEYEPPTNPNPNVF
LSSSSSDNLPPFPSPFPFLFSSSNPALDLQSQSDLSVLLGGPHHQSPSSSATAIDPEVFN
PFLFLQNYLQNLMSGGANIQFVLENSSGDSPFRLPANLGDYFIGPGLEQLIQHLAENDPN
RYGTPPASKSSIQSLPDIKVSDDLLASDSSQCAVCKDTFELGSVAKQMPCKHNYHSDCIL
PWLALHNSCPVCRYELPTDDLDYEQQIQGTQAPVNPAAADSGGAGESQGNSPAAQTAERR
FRISLPWPFRAFGSPAETSNSGNGNNNEGETNPNSGDRRNRDLGSETRQEDLD
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccggcccaccaccagcagccgtccccaccggcccccagccctacttctgccat
cactgcaatcgccctgtctccataactccattaccttcctccgatcttgtctgccctatt
tgcaacggtggcttcctcgaagaatacgaaccccccacaaaccctaaccctaatgtcttc
ctctcctcctcctcctcagacaatcttccccccttcccttctccatttcctttcctgttt
tcctcctccaaccccgccctcgatcttcaatcccagtccgatctatccgtcctcttaggt
ggcccccaccaccaatctccgtcctcttcggccactgccatcgatcccgaagtcttcaac
cctttcctcttcctccagaactacctccagaacctcatgtctggcggtgccaacatccaa
ttcgttctcgagaattcaagtggtgattccccgttccgactccctgccaacctcggcgac
tacttcatcgggcctggcttagagcagctcatccagcatcttgctgagaacgatcccaac
cgttacggcaccccgcctgcatcaaagtcttccatccagtcgctccctgatatcaaagtc
tcagacgacctgctggcgtccgactcatcgcagtgtgccgtctgcaaggacacgtttgag
ctcggttcggtggcaaagcagatgccgtgtaagcacaactaccattcggactgcatcctc
ccgtggcttgctctgcacaattcttgccctgtatgccggtatgagctcccgacggatgat
ctggactatgagcagcagattcaagggacgcaggccccagtgaatccagcagcggcagat
tctggtggggctggcgagtcacaggggaattctccggctgctcagactgcggagcggaga
tttaggatctcattgccatggcccttcagggcttttggatcgccagcagagacaagcaac
agtgggaatggtaacaataatgaaggggagacgaatccgaattcaggtgatcgaaggaat
cgggatttggggtcggagacaaggcaagaagatttggattga
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