Magnolia sinica: 131243093
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Entry
131243093 CDS
T09699
Name
(RefSeq) autophagy protein 5 isoform X1
KO
K08339
autophagy-related protein 5
Organism
msin
Magnolia sinica
Pathway
msin04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
131243093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msin04131
]
131243093
03029 Mitochondrial biogenesis [BR:
msin03029
]
131243093
Membrane trafficking [BR:
msin04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
131243093
Mitochondrial biogenesis [BR:
msin03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
131243093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_HBR
ATG5_UblB
Motif
Other DBs
NCBI-GeneID:
131243093
NCBI-ProteinID:
XP_058098170
LinkDB
All DBs
Position
4:49208142..49259069
Genome browser
AA seq
369 aa
AA seq
DB search
MELGTEAQKLVWEGAIPLQIHLHESEVTTLPPPPPALVLGPRIGYLPLLIPLIKPHFNST
LPPGVDTVWFDYKGLPLKWNTPTGVLFDLLCAEPERPWNLTVHFRGYPGDALTPCDGEDS
VKWSFINSLKEAAYIINGNCKNIMNMSQADQLELWRCVAKGNMEGYLKISSKLKLGTVSD
ECSAQPQKNIGETDAIVPSRAGRIPVRLYVRNVGEDLDDLEDASTVDSWDKLIFINLAVE
IRKEEGKCFTLRDAVKTLLPDLFMDEPSIDEQISRMEMEVVSRVSETDTSSHGDPGYVSS
TRSEGIEEASDKQVQPSPRKAGIKLIRIQGIEPRWDVPFSWVVNNLMNPEYFLHICVYVG
VSTDQDEAG
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggagctaggcacggaagcgcagaagctggtgtgggaaggagcgattcctctccagatt
catctccacgaatctgaagtcacaacactccctcctcctcctcccgctctcgttttaggt
cctcggattggctacctgcctttgttaatacctcttataaagcctcatttcaattccaca
cttcctcctggggttgacactgtgtggtttgactacaaaggattgccacttaaatggaat
acaccaacgggagttctctttgatcttttatgtgctgaaccagaaaggccttggaatctt
acggttcattttagaggatatcctggggatgctttgaccccctgtgatggtgaagatagt
gtgaagtggagcttcattaattcattaaaggaggcagcatacataatcaatgggaactgc
aagaacatcatgaatatgtcccaagctgatcagttggagctgtggcgatgtgtggcaaaa
ggcaacatggaagggtacctcaagatatcatctaagcttaaacttggaacagtttcagat
gagtgttctgcacagcctcaaaaaaacattggtgaaactgatgccatcgttcccagccga
gcaggcagaattcccgttcggctttacgtgcggaatgttggtgaagatcttgatgattta
gaagatgcatctacagttgatagttgggacaaactcatcttcataaacctagcggttgag
attcgcaaggaagaaggcaagtgtttcactttacgtgatgcagtgaagactcttctacct
gatcttttcatggatgagccctcaatcgatgaacaaatatcgagaatggagatggaggtc
gtttcgagagtcagtgaaacagatacatcgagccatggggatccgggatatgtaagcagc
acaaggagtgaagggatagaagaagcatcagataagcaagtgcagccatccccaagaaag
gctgggattaagctgattcgcattcagggaattgaacccagatgggatgtcccattctct
tgggtcgttaacaacttgatgaacccggaatactttcttcatatctgcgtatatgttgga
gtttcgacagatcaagatgaagctgggtga
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