Magnolia sinica: 131243273
Help
Entry
131243273 CDS
T09699
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
msin
Magnolia sinica
Pathway
msin03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131243273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131243273
03036 Chromosome and associated proteins [BR:
msin03036
]
131243273
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131243273
Chromosome and associated proteins [BR:
msin03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
131243273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
131243273
NCBI-ProteinID:
XP_058098481
LinkDB
All DBs
Position
4:80202380..80252574
Genome browser
AA seq
1082 aa
AA seq
DB search
MEMLVITGHRKRGFSDELQYMRDDDPVGCFSSNESYTDLSSSNVKSQFKKRNISRDGGCS
SCLIFGGIEASLPVLRSSDYFMEPSLKELAERELIDNSYCCRVPNFTVGRVGYGHVKFLG
ETDVRWLDLDQIVKFDRHEVLVYRNESNKPAIGQGLNKAAEVTLIIHIRLPASDGVKHNK
LVDKLRSSTKKQGAHFISFDASSGEWKFLVRHFSRFGLNQDDEDDIVMEDATVQHPAEAS
GSDGLEVDEEPQVGPAGTVLSHSLPAHLGLDPVKMQEMRMLMFPVEEEAEDVDIPLSHEK
WPFGKGHIRSNASSNSRGTIHKPPLQYSAPKTSQKSSPSPMRKAPIALLEYKTNGSNLSP
PGTIFMTRQNKGMPLRTTKVEGFKLDLKHETPIANNHSSNIVDAALFMGRSFRVGWGPNG
VLVHTGMPVGNASLRKTLSSVINIEKVAIDRAVRDENNKVKEELVDLCFASPLNFHKSIS
HENTNVEVGSFKLKLQKLVSSRLMLSEISRGYIGIIERQLDIPGLSTSTRLFLVHQVMVW
ELIKVLFSAKEISSHSRAADADDGEDMMHDNKDGFLAMDPEAYPFSRRAEFSYWLQESVC
HRVQGEVSCLNESNDLEQIFLLLTGRQLDAAVELAASRGDVRMACLLSQAGGSMLSRSDM
AQQLDLWRINGLDFKFIENDRIKLYELLAGNIQGALHDMKLDWKRYLGLLMWYQLPPDTS
LPIIIRTYQQLLSDGRAPHPVPVYIDEGPLEEAPNWSHGDRFDLGYYLMLLHADEEKAFG
ILKNMFSAFSSTHDALDYHMIWHQRAVLEAVGAFSSDDLHLLDMSFVSQLLCVGQCHWAI
YVVLHMPYRDDFPYLQTNIIREILFQYCETWSTQEIQRQFIEDLGVPSAWMHEALAMYFQ
YYRDLPKALEHYLKCANWQRAHSIFMTSVAHSLFSSSKHSEILRLAITMEEHKSEIADWD
LGAGLYIDFFYIRGSLLEENMMPELDSLEKKNDECRNFFSRLNESLSVWGSKLPLAARAT
YSKMAEELCTLLALDGGEDSTREDQMSCFETMLNAPTPEDWRSCHLQDAVSVFTFSLSER
AS
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggagatgctagtgattacgggccatcgaaaaagaggtttttcggatgagctccaatat
atgagagatgatgacccagttggctgtttctcttcaaatgaatcctatacagacttgtcc
agttccaatgtgaaatctcagttcaagaaaagaaacatttctcgtgatgggggctgttct
tcatgtctaattttcggcgggattgaagcttccttacctgttttacgttcttctgattat
tttatggaaccttctctgaaggagctggctgagagagaactcattgataacagctattgc
tgcagggttccaaacttcactgttggaagggtgggttatgggcatgttaagtttttggga
gaaactgatgttagatggttggatttagatcagattgtcaagtttgacaggcatgaggtt
ctggtatataggaacgaaagtaacaaaccggcaattggtcaaggccttaacaaggctgcc
gaagtaaccttgataattcacataaggttaccagcttcagatggagtgaaacacaataaa
ctcgtggataaactgaggagtagcacaaaaaaacagggggcacatttcatttcgtttgac
gcgtcgagtggtgaatggaaatttttggttcgtcatttcagcagatttgggttgaaccaa
gatgatgaagatgatattgtcatggaagatgctacggttcaacatcctgcagaggcaagt
ggtagtgatgggttggaagtagatgaggagcctcaagtgggtcctgctggaactgtctta
tctcattctcttccagcgcatcttgggcttgatcctgtcaagatgcaagaaatgagaatg
ttaatgtttcctgtagaggaggaggctgaagatgttgatatccccctttcacatgagaag
tggccttttggaaaggggcatattagatcaaatgccagctccaattcgagagggaccatt
cataaacctcctctacagtattctgctccaaagacaagccaaaaaagtagcccgtcccct
atgcgtaaagcaccgatagctttgcttgagtacaaaacaaatggttctaacttgagccca
cctggtaccattttcatgacccgccaaaacaagggcatgccattgaggacaacgaaagta
gaaggtttcaaactggacttgaagcatgaaacacctatagccaacaaccattctagtaac
attgttgatgctgcactattcatgggaaggtcatttcgcgttggctggggaccaaatggc
gtcctcgttcacaccggaatgcccgtaggcaatgccagtctcagaaaaacattatcttct
gtgatcaacatagagaaagttgcgatagatagagcagtcagagatgaaaataacaaagtg
aaagaggagcttgttgacttgtgctttgcttctcctctaaatttccacaagtcaataagc
catgaaaatacaaatgttgaagtgggctccttcaaattaaagcttcaaaaacttgtatct
agtcgtttaatgctttcagagatttcccggggttatattgggattatcgagaggcagctt
gatattcctggattgtctacatctacccgcctatttttggttcaccaagtcatggtttgg
gagttgataaaggttctcttttctgcgaaggaaataagcagtcattcaagagctgcagat
gccgatgacggagaggatatgatgcatgacaacaaggatggctttctagccatggaccca
gaagcataccctttttctcgcagagctgagtttagttattggttgcaagagagtgtttgt
caccgtgtacaaggagaagtaagctgtttaaatgagtccaatgatttagaacaaatcttt
ttactcctgactggacggcagctggatgcagcagtagaattggctgcatctagaggagat
gtcaggatggcctgtttgttaagtcaggctggtgggtcaatgttgagccggtctgacatg
gctcaacagcttgacttgtggagaatcaatgggctggacttcaagttcattgagaatgac
aggataaaactgtatgagttacttgcaggtaatattcaaggcgctcttcatgatatgaaa
ctagattggaaaaggtacctaggactgcttatgtggtatcaactgccaccagatacttcg
ttgccaatcattattcgcacttatcagcagcttctcagtgatggaagagctccgcatcct
gttccagtttacattgatgaaggacctctggaagaagcccctaattggagccatggtgat
cgttttgaccttgggtattatcttatgctccttcatgctgatgaagagaaggcctttgga
attctgaaaaacatgttctctgccttctcttccacacatgatgctcttgactaccatatg
atttggcatcaaagagctgtactggaagctgtgggtgctttcagctcagatgatcttcat
cttcttgacatgagctttgtctcgcagcttctatgtgttgggcagtgtcattgggccatc
tatgttgttctccacatgccttaccgtgatgatttcccgtatctccagactaatatcata
agggaaatcttattccagtattgcgagacctggagcacacaagaaatacaacgccaattt
attgaagatcttggagtaccatctgcatggatgcatgaggctttggcaatgtattttcaa
tattacagagatctaccaaaggcccttgaacattatctcaaatgtgccaactggcaaaga
gctcactcaattttcatgacttcagtcgcccattccttgttttcttcatctaaacattca
gagatcttgaggcttgcaataaccatggaagagcacaagtcagaaattgcagactgggac
ttgggtgctggactttatattgatttcttctatattagaggttctttgcttgaagaaaac
atgatgcctgaactggattctcttgagaagaaaaatgatgaatgcagaaatttcttcagt
cgcttgaacgagtcattgtcagtttggggaagcaaattaccactggctgcaagagcaacc
tattcaaagatggcagaggagctctgcactctgcttgcattggacggtggggaagactcc
acacgtgaagatcaaatgagctgcttcgagactatgctcaatgctcctacaccagaagac
tggcgttcatgtcatttgcaagacgctgtctcggtttttacgttctctctttccgaaagg
gcctcttag
DBGET
integrated database retrieval system
