Magnolia sinica: 131243323
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Entry
131243323 CDS
T09699
Name
(RefSeq) LOW QUALITY PROTEIN: translation initiation factor IF-2, chloroplastic
KO
K02519
translation initiation factor IF-2
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
msin03012
]
131243323
03029 Mitochondrial biogenesis [BR:
msin03029
]
131243323
Translation factors [BR:
msin03012
]
Eukaryotic type
Initiation factors
MTIFs
131243323
Prokaryotic type
131243323
Mitochondrial biogenesis [BR:
msin03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
131243323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
EF-G_D2
MMR_HSR1
IF2_N
Ras
GTP_EFTU_D2
RsgA_GTPase
PmbA_TldD_1st
Roc
Arf
NYD-SP28
Motif
Other DBs
NCBI-GeneID:
131243323
NCBI-ProteinID:
XP_058098563
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Position
1:complement(25009129..25020861)
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AA seq
1017 aa
AA seq
DB search
MLELVXVAMASLASLATLGSARPNPSVSFDGSPAVIRRFSLVKGVGFSSSLGGRKWGCTS
VCRCTITTELIAELENSASSESTAFRGSKDDDADLILKPSPRPVLKARPKAEVSIPWAPA
KPVRDSPGDKTEIVEDKDRVIESLGEVLEKAEKLEAVNLRKLDSKESSSSSVNGKSASVI
NANSRVGRTVNPKVASKSKTLKNVWTKGDPVASTKKVVKEVPKVEKEGFKTDGAEKAEIQ
PRIPQPPSKVQPRLQAKPAVAVPPVVKKPVILKDVGAAPRASVSEGTDAEPQTRERKPIL
IDKFASKKPVVDPLLAQAVLAPPKPVKSSVISKIKDERRKKAGATGGLRRRLVNDDKIPD
EELSDVSIPGAPGVRKGRKWSKASRKAARLQAAKDAAPVKVEILEVGEEGMLTEDLAYNL
AVSEADIFSYLFSKGIKSDAVYTLDKDMVKMICKEYDVEVIETTAVKVEDMARKKEVLDE
EDLDMLEDRPPVLTIMGHVDHGKTTLLDYIRKSKVVASEAGGITQGIGAYKVHVPVDGKL
QPCVFLDTPGHEAFGAMRARGARVTDIAIIVVAADDGVRPQTNEAIAHAKAAGVPIVIAI
NKIDKDGANPERVMQELSSAGLMPEDWGGDTPMVQISALKGENVDDLLETVMLIAELQEL
KANPHRNAKGTVIEAGLHKSKGPVATFIVQKGTLKRGNVVVCGEAFGKVRALFDDRGSQV
AEAGPSTAVQVIGLNNVPIAGDEFEVVDSIDFAREKAEARAEALRVERISAKAGEGKVTL
SSIASAVSAGKQSGLDMHQLNIILKVDVQGSIEAIRQALQVLPQESVTLKFLLHAPGDVT
TSDVDLALATKAVIFGFNVKVPGSVKSYADHKGVEIRTYRIIYELIDEMRNAMEGLLEPV
EEQIPIGSADVRAVFSSGSGKVGGCMVTEGKVVKGCGVRIIRNGKTVYTGSLDSLRRVKE
MVKEVNAGLECGIGVDDYSDWEVGDVVEAFNTVKKQRTLEEASASVAAALAGAGVQV
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgttggagttagtgtgagtagccatggcttctcttgcttccctggcgacactgggaagt
gcgaggccaaacccgtctgtctccttcgatggttctccagcagtaattcggagattttcg
ttagttaagggagttggttttagtagttccttgggtgggcggaagtggggttgcacatcg
gtctgtagatgtacgataacgacagaattgatcgctgagttggagaattcagcttcctca
gaatctactgcgtttagggggagcaaagacgatgacgcagatctcatcctgaagccctct
cccaggcctgtcttaaaggcccgaccaaaggctgaagtttcaattccatgggccccagca
aagcccgttagggattctccaggtgataagacagagattgtggaggacaaggatagggtg
attgagtcgcttggggaggtcttggagaaggcggagaagttggaagctgtgaatttgaga
aaattggatagtaaagagagtagtagtagcagtgtcaatggtaagtcagcatcagttata
aatgctaactctagagtaggtagaaccgtgaatccaaaggtggcctcgaagtctaaaaca
ttgaagaatgtttggacaaagggtgacccagttgcaagcacaaagaaggttgttaaagag
gtgcctaaggttgagaaagagggcttcaagacagatggggcagagaaagcagaaattcaa
cctcgtattcctcagccaccttcaaaggtgcagccaaggcttcaagcaaaacctgctgta
gctgttcctcctgtagttaagaaacctgtgattttgaaggatgtgggtgctgctccaagg
gcctcagtttctgagggcacagatgccgagccgcaaacaagagaacggaagccaattctc
atagacaaatttgcttccaagaagccagttgttgatcctttgctggcacaagccgttttg
gctccaccaaaaccggtgaaaagctctgtcatctcaaagattaaagatgagcgtcgcaag
aaagctggtgcaactgggggtctgcggaggcgattggtcaatgatgacaagatccccgac
gaggagcttagtgatgtctctattcctggagcaccaggggtgaggaaaggcagaaagtgg
agtaaggcgagtcgcaaggcagctagactgcaggcagctaaggatgcagctcctgttaaa
gtggaaattcttgaggtgggggaagaaggaatgttgacagaggacctggcttacaactta
gctgtcagcgaagccgatattttttcttatctgttctctaaggggattaagtccgatgca
gtgtatacattggacaaagacatggtcaaaatgatatgtaaggaatatgatgtggaagtc
atagaaactactgctgttaaagtagaagatatggcaagaaagaaggaagttcttgatgag
gaggacttggacatgctagaagataggcctccagttcttacgataatgggtcatgtcgat
catggaaagacgactcttttggattacattcgcaaaagcaaggtggttgcatctgaagca
ggtgggataacacaaggaattggggcatataaggtgcatgttcctgttgatggaaagctt
caaccatgtgtttttctcgatacacctggccatgaggcatttggtgcaatgagggcaaga
ggagcaagagtgaccgacattgctattatcgtggtggctgctgatgatggtgtccgccct
caaacaaatgaggccatagctcatgccaaagcagctggggtgccaattgtaatagctata
aataagatagataaggatggagctaatccagagcgagtaatgcaagaactttcttctgct
ggcctaatgccagaagactggggtggtgatacccctatggttcagatcagtgctcttaaa
ggggagaacgtggatgatttgctagaaactgtcatgcttattgctgagttgcaagagttg
aaggccaatcctcacagaaatgcgaagggcactgtcattgaggcaggtcttcataaatca
aaagggcctgtagccacatttattgtgcagaagggtaccctcaaaagaggcaatgtagtg
gtttgtggtgaagcctttggaaaggtgcgggctttatttgatgacaggggaagtcaagtt
gctgaagctggtccatctacagctgtgcaggtcattggcttgaacaatgttccaattgct
ggtgatgaatttgaggttgttgactccattgactttgcacgcgaaaaggcagaggcacgt
gcagaagcattacgggttgagcggatatctgcaaaggctggggaagggaaggtcacgctt
tcgtcaatcgcatctgcagtttcagcaggaaagcagtctggtttggatatgcatcaactg
aatataatcttgaaggttgatgtccagggatcaattgaggccatcagacaagcccttcaa
gtcctccctcaggaaagtgtcacactgaaattcttgctgcatgcaccaggggatgtaacc
acgagtgatgttgatctggcccttgccactaaggctgttatatttgggttcaatgtcaaa
gtgccaggttcagtaaagagctatgcagatcacaagggtgttgagattaggacatataga
atcatctatgaacttatcgatgagatgcggaatgccatggagggactcctggagcctgtt
gaggaacaaataccaataggatctgcagatgtccgagctgtatttagtagtggcagtggg
aaggttggtggatgcatggtgacagaagggaaggtagtgaagggctgtggtgtccgcatc
atccgaaatggaaagactgtttacactggcagtcttgattctttgaggcgggtgaaggaa
atggtcaaagaggtcaatgctgggctggagtgcggtatcggcgttgatgattactcagac
tgggaagttggtgatgttgttgaggcctttaacacagtaaagaagcagcggacgcttgaa
gaagcatctgcttcggtggcagctgcattggccggagcgggagtccaggtgtga
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integrated database retrieval system
